Neobacillus oceani: V1499_09365
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Entry
V1499_09365 CDS
T11220
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
noce Neobacillus oceani
Brite
KEGG Orthology (KO) [BR:
noce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noce03032
]
V1499_09365 (topA)
03400 DNA repair and recombination proteins [BR:
noce03400
]
V1499_09365 (topA)
Enzymes [BR:
noce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
V1499_09365 (topA)
DNA replication proteins [BR:
noce03032
]
Prokaryotic type
DNA Topoisomerases
V1499_09365 (topA)
DNA repair and recombination proteins [BR:
noce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V1499_09365 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XOL52921
LinkDB
All DBs
Position
1879295..1881370
Genome browser
AA seq
691 aa
AA seq
DB search
MAEFLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIENDFDPKYITIRGK
GPVLKELKAAAKKAKKVYLAADPDREGEAIAWHLANTLDVDSNSECRVVFNEITKDAIKE
SFKHPRAINMNLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREK
EIQAFVPEEYWTIGGTFTKGKDAFEASFYGIDGQKRELHSEQDVKEALAGMNGDRFTVAS
VTKKERRRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEVAQSEAKNYISSVFGENFLKEEAGKEKKQTNAQDAHEAVRPTSSFRDPGSLK
EFLSRDQLRLYKLIWDRFIASQMAQAVMDTMSVDLVNGNVTFRATGSKIRFPGFMKLYVE
GTDDQVEETDRMLPDLKEGHEVSNTGIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFIPTELGEIVNELTLEFFPEILDVEFTAKMEQDLDDVEDGK
VAWVKIIGEFYEGFEKRLEVAEKEMQEVEIKDEPAGEDCENCGNPMVFKMGRFGKFMACS
NFPDCRNTKAIVKEIGVTCPKCEKGQVIERKSKKKRIFYGCDRFPECDFLSWDKPLPRNC
PKCDHVLIEKKLKKGVQVQCSNCDYKEEQQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttcttgtcatcgtagaatcgccggcaaaggcgaaaaccatcgagcgatat
cttggaaaaaaatataaagtaaaagcgtccatgggccatgtacgcgatttgccgaaaagc
caaatgggcgttgatatagaaaatgatttcgatccaaaatatatcacgatccgcggcaaa
ggcccggtcctgaaagaattaaaagccgccgcgaagaaagcgaagaaagtctatctcgcg
gctgaccccgacagggaaggggaagcgattgcctggcatctggccaatacccttgatgtt
gattcaaattcggagtgcagggttgttttcaatgaaattaccaaggatgcaatcaaggaa
tcttttaagcatccaagggcgatcaacatgaatctcgttgatgcccagcaggccagaagg
atactcgacaggcttgtcggctacaatatcagcccgttgctatggaaaaaagtcaaaaaa
gggctttctgccggaagggtccagtcagtcgctgtcaggttgattattgaccgtgaaaag
gaaatccaggcattcgtcccggaagaatactggacaattggcggaacgtttacaaaagga
aaggatgcatttgaagcgtccttttacggcattgacggccagaagagggaactccattcc
gagcaggatgtaaaagaagcgctggctgggatgaacggcgaccggtttaccgtcgcgtcc
gtaacaaaaaaggaacgtaggaggaatcctgcaccgccgtttacaacatcttccctccaa
caggaagctgcaaggaagttaaatttccgcgcaaaaaaaacaatgatgctcgcccagcag
ttgtatgaaggaatcgacctcggaaaagagggcacagttggtctcatcacctacatgagg
acggattcgactagaatctccgaagttgcccagtccgaagcgaagaattatatctcctcg
gtgttcggtgagaacttcttgaaagaggaagctggaaaagagaagaagcagacaaacgca
caggatgcccacgaagcggttcgccctacaagctcattccgtgatcccggttcactgaag
gaattcctctcaagggaccaactaaggctgtacaagctgatttgggatcgtttcatcgca
agccagatggcccaggctgttatggatacgatgagtgtcgaccttgtaaatgggaatgta
accttccgggccacaggctcaaaaattcgcttcccaggctttatgaagctgtatgttgaa
ggtacggatgatcaggtggaggaaacggaccgcatgcttcctgatttaaaggaaggccat
gaggtcagcaataccggcatcgaaccaaagcagcacttcacccagccgccgccaaggtat
acggaagcacggcttgttaagactctggaggaactggggataggacgtccgtcaacatac
gccccgacgctcgacacgatccagaaacgcggttatgttgcgcttgataataagaggttt
atcccaacggagcttggggaaattgtcaatgaactgacgctggaatttttcccggagatt
ctcgatgtcgagttcaccgccaaaatggaacaggatcttgatgatgttgaagacggcaaa
gttgcctgggtaaagattataggcgaattctatgaaggattcgagaaaaggcttgaagta
gccgagaaggaaatgcaggaagtagaaatcaaggatgaacctgccggcgaagattgcgaa
aactgcggcaaccctatggtctttaaaatgggccgttttggcaagttcatggcctgcagc
aattttccggactgccggaatacaaaggcgattgttaaggaaattggtgtcacatgcccg
aaatgcgaaaaaggccaggtcattgaacggaaaagcaagaaaaagcggattttctatgga
tgcgaccgtttcccggaatgcgacttcctatcctgggataagccgcttccaaggaattgc
ccgaagtgcgaccatgtcctgattgagaagaagctgaaaaaaggcgttcaggtacagtgc
tccaattgtgattacaaggaagagcagcaaagctag
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