Neobacillus oceani: V1499_12025
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Entry
V1499_12025 CDS
T11220
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
noce Neobacillus oceani
Pathway
noce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
noce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
V1499_12025
09124 Replication and repair
03420 Nucleotide excision repair
V1499_12025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noce03021
]
V1499_12025
03036 Chromosome and associated proteins [BR:
noce03036
]
V1499_12025
03400 DNA repair and recombination proteins [BR:
noce03400
]
V1499_12025
Enzymes [BR:
noce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
V1499_12025
Transcription machinery [BR:
noce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
V1499_12025
Chromosome and associated proteins [BR:
noce03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
V1499_12025
DNA repair and recombination proteins [BR:
noce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
V1499_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
XOL49214
LinkDB
All DBs
Position
2405426..2407705
Genome browser
AA seq
759 aa
AA seq
DB search
MADFHISARALAEYVYRSGSIETGIGAASAMAEGTKAHQFVQKRYKEGDQKEVPLRISIQ
YEDIDFIIDGRCDGLLLEDGQLVIDEIKSTSLNLDTIEVDSYPVHWAQAKCYAYIVAAEQ
GIGQIGVRITYVQRATYEQKHFNRIFSINELQQFIQQLLIDFAPYAKLTISLMERRTETA
QKLAFPFPAYRPGQKPLAGSVYRTINEGGNLFVNAPTGIGKTISTLFPAIKAMGEGNIGH
IFYITARTTTRKAAEQALALMASKGLHVTSVSLTAKEKTCFNEEHGCQPGNCAFAAGYYD
RINGAVLNILENGTFLNREKIETYARKHRVCPFEFSLDLAYLADVVICDYNYIYDPRVSL
KRLFDEKKKRAALLVDEAHNLPDRARDMFSASLEKSLFLTVKRGYKSANRELGKAASKVN
QFFIDARKRLSGERECLLEELPEGLVETVREFVGEAEKQLAAESASEEMLLDAYFNAQNF
LKAEMVADERFAVYTTVNHGEVSIKLFCLDPSELLRKTGKGFRAKVFFSGTLVPPDYFRE
MLGGVEGDPFLSVSSPFDTSQTDVFIQALSTRYRDRERSYNRIADTIRMLLDERPGNYFC
FFPSYQFMEKVVNILEPGNEVEYIIQQSNMGEEERDEFLSHFRTRGNNSLVGFAVLGGIF
SEGIDLPGDSLNGVVIVGPGIPQISFERDLLKKFYSSTGRNGYDYAYTFPGMVKVLQAGG
RLIRSETDTGTILLIDDRFLQQKYMSLFPDEWEPFTIIE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttccatatatctgcaagggcacttgcggagtacgtatacaggagcggcagt
attgaaaccggaattggcgcggcatctgcgatggcggagggcacaaaagcccaccaattt
gtccaaaagaggtataaagagggcgatcaaaaagaagtcccactccgaatttcaatccaa
tacgaagacattgattttatcattgatggacgatgtgatggcctgcttctggaagacggg
caactcgttattgatgaaatcaagtctacttcactaaatcttgatacgattgaagtggac
tcttatcccgtccactgggcacaggcgaaatgctatgcgtatattgtggcggctgaacag
ggaatcggccagattggcgtaagaattacttatgttcaaagggctacatatgaacaaaag
cattttaatcgaattttttctataaatgagttacagcaatttattcaacagctgctaatc
gatttcgccccctacgcgaaacttacgatttccctaatggaaaggcggacagaaacggcg
caaaagcttgcctttcctttcccagcttacaggcccgggcaaaaaccgcttgccggttct
gtataccggactatcaatgagggagggaatttatttgtaaatgcaccgaccgggattgga
aagacaatttcgacactgttccctgccataaaagcgatgggcgagggaaatattggccat
attttttatattaccgcaaggacaacgaccaggaaggccgcggagcaggcgctggcccta
atggcatccaaggggcttcacgtaacctctgtttcccttactgcaaaggagaaaacatgc
ttcaatgaagaacacgggtgccagccaggaaattgcgcatttgccgctggctattacgac
cggattaatggggcggtccttaatatattggagaacgggacgtttttgaacagggaaaaa
attgaaacgtacgcccggaaacatcgtgtttgcccattcgaattttctctggaccttgct
tatcttgccgatgtggtgatttgtgattacaactatatttacgatccgcgtgtttcgtta
aagcgtctttttgatgaaaaaaagaaacgggcggccctgctcgtagatgaagcccacaat
cttcccgatcgtgccagagacatgttctccgcttcactcgagaagtctcttttccttacg
gttaaaagaggctacaaatcagcaaaccgtgaattgggaaaggcagcctccaaggtcaac
caattttttatcgacgcgaggaaaaggctgtcaggtgaaagagaatgcttgcttgaggaa
ttgcctgaagggctcgtggaaacggtaagagagtttgtcggcgaagccgaaaagcagctt
gcggccgagtccgcttccgaagaaatgctgctcgatgcgtattttaatgcccagaatttt
ttaaaagccgaaatggtggcagatgaacgatttgccgtctataccacagtgaatcacggg
gaagtttcaataaaactgttttgcctggatccgtccgaattgctcaggaaaaccggaaag
ggatttagggcaaaagttttcttttccggaacattggttccgcccgattattttagggaa
atgctcggcggagtagagggcgatccattcctgtccgtttcttcgccgtttgatactagc
cagacggatgtatttattcaagctttgtccacccgctatagggacagggagcgttcttac
aaccgtattgccgataccatccggatgcttctcgatgaaaggcctgggaattatttttgt
tttttcccatcctatcaattcatggagaaggtagtgaatatcctcgagcctgggaatgag
gtagaatatattatccagcaatccaatatgggtgaggaggaacgggatgagttcctttct
cacttcaggacaaggggcaataacagccttgttggttttgccgttcttggtggaattttt
tcagagggaattgatcttcccggagatagccttaatggggtggttatagtagggcctggg
attccacagatttcattcgaacgagacttgctaaagaagttttattcttcaacggggcgc
aatgggtatgattatgcctacacatttccaggaatggtcaaagttcttcaagctggcgga
aggctaatccgctccgagacagacaccggtacaattcttttaatcgacgaccgattcttg
cagcagaaatatatgagcctttttccggatgagtgggagccatttaccattattgaataa
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