Neobacillus oceani: V1499_13950
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Entry
V1499_13950 CDS
T11220
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
noce Neobacillus oceani
Pathway
noce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V1499_13950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noce03019
]
V1499_13950
03400 DNA repair and recombination proteins [BR:
noce03400
]
V1499_13950
Enzymes [BR:
noce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1499_13950
Messenger RNA biogenesis [BR:
noce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V1499_13950
DNA repair and recombination proteins [BR:
noce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V1499_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
XOL49569
LinkDB
All DBs
Position
complement(2769714..2771213)
Genome browser
AA seq
499 aa
AA seq
DB search
MIEQTLYRYFGYTSFRPGQKEVVMSLLNGIDTLAMLPTGTGKSLCFQLPGYLFEGVVVIV
SPLLSLMQDQVEQMMKRGEKRVLALNSFLSPLEKRQALASLNRYKFIFLSPEMLGFPHII
ERFKEIPVSLLAIDEAHCISQWGYDFRPDYLRIGYFRESMGNPLTLALTATATPEVRDDI
ANKLGIEGGVRIETSIDRPNISFHIEKLASPSEKNDRALYWVKELKQPGIVYFSSKKAAE
QTAAYFRKMGLAKAMAYHGGMDMEQRVLIQQQFINGQLDVICATSAFGMGIDKENVRYVI
HYHMPMQIESYLQEIGRAGRDGHPSTAILLYSEGDEQLQYYLAEGELPTKGQLDIFFSSL
GGLSPEFSSIKEMEQAAFTAGLSDIQWRWLAGFLDQKNELAFLKLKGELAEYITGRNFTK
MEHIRRMREWVDSPGCLRNYFLKYFHEPELNPGRPNCCDNCGLDMDIYKKGEEGIPVQGK
TKGWKERLSELLIGEANDG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacaaaccctttatcgttattttggatatacctcattccgtccaggacaaaag
gaagtggtcatgtcgctgttgaacggcattgacacacttgccatgctcccgacaggaacc
gggaaatcactctgtttccagctgccgggctacctctttgaaggagtagtcgttatcgtt
tcaccgcttctctcacttatgcaggaccaggtcgaacagatgatgaaaaggggtgaaaaa
cgagtcttggcgctgaattcctttctatctccccttgaaaaaaggcaggccctcgcatcg
ctcaatcgctataaatttatctttctttcaccggagatgcttggttttcctcatataatt
gagagattcaaagagattcccgtctccttgctcgcgattgatgaagctcactgcatttcg
caatggggctatgacttcaggccggactatctaaggattggatacttccgtgaaagcatg
ggcaatcccttgacacttgccttaacagcgacggccactccggaagtaagggatgatata
gcgaataagctggggattgaaggtggggttagaatcgaaacgagcatcgatcggcccaat
atttctttccacattgaaaaactggccagcccatctgaaaaaaacgacagggcactatat
tgggtaaaggaattaaagcagcccggcatcgtatacttttccagcaaaaaagccgccgaa
caaacggcagcctatttcaggaaaatgggcctcgcaaaggcgatggcctatcatggcggc
atggatatggaacaacgagtcttaatccagcagcagttcattaatgggcagctggatgtc
atttgcgctaccagcgcattcgggatgggtattgacaaggaaaatgttcgctatgtcatt
cactatcatatgcctatgcaaattgaatcctatcttcaggaaatcggcagggctggaagg
gatggacatccttccaccgcgatcctcctttattctgaaggtgatgaacagcttcaatac
tatctggctgaaggcgagttgcccacaaaagggcaattggatatattcttttcgtccctt
ggcggtttatctccagaatttagcagtataaaggaaatggaacaggctgccttcacagct
ggattatccgatattcaatggcgttggcttgccggcttccttgaccagaagaatgagctg
gcattcctaaaacttaaaggtgaactggccgagtatattacaggaaggaattttacaaaa
atggagcatatccgccgtatgcgtgaatgggttgattcgcctggctgccttcgaaattac
tttctaaagtattttcatgaacctgaactgaatcctggccggccgaattgctgtgataat
tgcggcttagacatggacatatacaaaaagggagaggaaggcattcctgttcagggaaaa
acgaaaggctggaaggaaaggctgtccgaacttttaattggtgaagcaaatgatggatag
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