Neobacillus oceani: V1499_15410
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Entry
V1499_15410 CDS
T11220
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
noce Neobacillus oceani
Pathway
noce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V1499_15410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noce03400
]
V1499_15410
Enzymes [BR:
noce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V1499_15410
DNA repair and recombination proteins [BR:
noce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V1499_15410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
AAA_12
nSTAND3
T2SSE
AAA_16
AAA
AAA_28
NTPase_1
UvrD_C
DEAD
NPHP3_N
AAA_17
DUF4926
TsaE
HHH
AAA_29
Motif
Other DBs
NCBI-ProteinID:
XOL49847
LinkDB
All DBs
Position
complement(3038250..3040697)
Genome browser
AA seq
815 aa
AA seq
DB search
MDQQNSLDLFSEQGKFVKGRPIVTIFHNETNLYTVARIRVDDTNDTYEDREAVVTGYFPK
LHDQETYLFYGEFKDHPKFGLQFQATHFRKDIPQSKQGVIAYLSSEIFKGIGRKTAESIV
EVLGENAISRILNEPSLLDSIPRLPPDKAKMLYDTLMEHQGLEQVMVALNQYGFGPQLSM
KIYQVYKEATIDIIQKNPYQLVEDIEGIGFGRADELGYQLGISGNHPDRIKAACLYTLET
ESMQAGHVYLEARDLLEKVKALLEENQRDVIGYNDITTELIKLEEEGKVAGEGQRVYLPS
LYFSEKGLVTNIKRILEQKDYSAQFPESEFLLALGELEERLGVEYAPSQKEAIQTAIQSP
MMILTGGPGTGKTTVIKGIVELYAELHGCSLDPKDYMKKDEAFPILLAAPTGRAAKRMSE
STGLPAVTIHRLLGFNGSEGFSHDEESSLEGKLLIVDETSMVDVWLANQLFKALPESIQV
ILVGDEDQLPSVGPGQVLKDLLRSERIPTVRLTDIYRQAEGSSIIRLAHEIKNGSLPADL
SAQQPDRSFIKCNGNQLAQVVEKVAANARKKGYHARDIQVLAPMYKGPAGIDRLNVILQE
LFNPNPDGKRKELAFGDVKYRIGDKVLQLVNQPESNVFNGDIGEIVSIFYAKENTEKQDM
AIISFDGIEVTYTRQDLNQITHAYCCSVHKAQGSEFPIVILPITRSYYRMLRRNLIYTAI
TRSRQFLILCGEEDAFRLGVERNDEQTRQTTLAEKLTEAIELDSPESSAGDGTDFAAENE
VFEERVPYGRASLEEVLMDTDPLIGMENVTPYDFM
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacagaattctctagacctgttttcagagcaggggaagtttgtaaaaggaagg
ccgatcgtaacgatttttcacaatgaaacgaacctgtatacggtcgcaaggatcagggtt
gatgatacgaatgacacgtatgaagacagggaagccgtggtcaccggttatttcccgaag
ctacatgaccaggaaacctatcttttctacggtgaattcaaggaccatccgaaatttggc
cttcaatttcaggctacccatttccgtaaggatatccctcagtccaaacaaggggtcatt
gcctatttgtcgagtgaaatattcaagggaatcggccgaaaaacggctgaaagcattgtg
gaagtccttggcgagaatgcaatttcccggattttgaacgaaccctctcttcttgactcc
atcccaaggctgccgccggacaaggcgaaaatgctctatgatacgctgatggagcaccag
gggcttgaacaggttatggtagccctcaaccaatatgggttcgggccgcagttgtctatg
aaaatctaccaggtttacaaagaagcgacaattgacattatccagaagaatccttaccag
cttgttgaggatattgagggcatcggcttcggccgggcggatgagcttggataccagctt
ggtatatctggaaaccatccagacaggatcaaagccgcgtgcctctatacgcttgaaacc
gaaagcatgcaggctggccatgtctatttggaagcccgtgacttgttggaaaaagtaaag
gcgcttctagaggaaaatcagcgggatgtcatcggctataacgatataaccaccgagctg
atcaaactagaggaagaaggaaaagtggctggtgaaggccagcgcgtctatttgccatcc
ctttatttttctgaaaaaggccttgtgacaaatataaaacggattctcgaacagaaagat
tacagcgcccagtttccggagtccgaattcctgctcgctcttggcgagcttgaggaacgt
cttggagttgagtacgccccatcacaaaaggaagcgattcagactgcgatccagtcacca
atgatgattctgacaggcgggcctggaaccgggaaaacgactgtcattaaagggattgtt
gagctttatgccgaactacacggctgctcgctcgatcctaaggattacatgaaaaaagat
gaagcttttccgatacttctcgcggcgccgactggaagggccgcgaagcggatgagcgaa
tcgactggcttgccggcagtcaccatccacaggctccttggtttcaatggcagcgaagga
ttcagccatgatgaagagtcgtcgcttgaaggaaagcttctaatcgtcgatgaaacatcc
atggtcgatgtttggctagcgaatcagctgttcaaggcgcttccggaatcaatccaggtc
atccttgttggcgatgaagaccagctcccttctgtcggccctggccaggtgctgaaggac
ttgctccgttcggaacggatcccgacggtcaggctgacggatatttacaggcaggcggaa
ggttcatccatcatccgcctcgcccatgaaattaaaaacggaagccttccagccgacctt
tccgcgcagcagccggacaggtcgttcatcaaatgcaatggaaaccagcttgcccaggtt
gtcgaaaaagtcgctgccaatgcccggaaaaaaggctaccatgcccgggatatccaagtg
ctggccccgatgtataaagggccagctggaatcgacaggctcaatgtcatcctccaggaa
ttattcaatccgaaccctgatggcaagaggaaagagcttgcgtttggcgatgtgaaatac
agaatcggcgataaggttctgcagcttgtcaatcagccggaaagcaatgtatttaatggc
gatatcggtgaaattgtgtcgattttttacgcgaaggaaaataccgaaaaacaggatatg
gccatcatttcctttgacggaatagaagtcacatatacccggcaggatttgaaccaaatc
acgcatgcatattgctgttccgtccataaagcgcaaggaagcgagtttccgattgtcatc
ttgccgattacccgcagctactaccggatgctgcgcaggaacctgatctatacagcgatt
acccggagcaggcagttccttatcctctgcggcgaggaagatgcgttccggcttggagta
gaacggaatgatgaacaaacaaggcagacaacgcttgccgaaaagctaacggaagcaatc
gaattggattcgccggaaagcagcgctggggatggtacagattttgccgctgaaaatgag
gtttttgaagagcgtgtcccttatggcagggcgtcacttgaagaagtgctgatggacact
gatccgcttatcggcatggaaaacgttaccccttatgatttcatgtga
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