Neobacillus oceani: V1499_15490
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Entry
V1499_15490 CDS
T11220
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
noce Neobacillus oceani
Pathway
noce03410
Base excision repair
noce03430
Mismatch repair
noce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V1499_15490 (recJ)
03430 Mismatch repair
V1499_15490 (recJ)
03440 Homologous recombination
V1499_15490 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noce03400
]
V1499_15490 (recJ)
DNA repair and recombination proteins [BR:
noce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
V1499_15490 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V1499_15490 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
V1499_15490 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
BHD_1
Motif
Other DBs
NCBI-ProteinID:
XOL49860
LinkDB
All DBs
Position
complement(3057591..3059957)
Genome browser
AA seq
788 aa
AA seq
DB search
MLNSRTRWIVRESNESTANKLAAELNISHLVSSMLVNRGLDTVEAARPFLFGGEKFHDPF
LLKGMDLAVSRIKRAIDSQEPVLIYGDYDADGVSSTTVLMITLQELGANVGYYIPDRFTE
GYGPNEAAFRKAAENGVKLIITVDTGISGVHEAEVARELGVDLIITDHHEPGPVLPDALA
IIHPKLPDSIYPFRDLAGVGVAFKLAHALYGQVPDHLLEIAAIGTIADLVSLKGENRLIA
KAGIDRLKVTENIGIKAILKCAGVNPSAINEETIGFTLAPRINAVGRLEHASMAVKLLLT
EDRTEADVLAQEMDGLNRERQAIVQEITEEAILQVDRDFPPDENKVLVVGKEGWNAGVIG
IVASRLVEKYYRPVIVLSYDIEKGLAKGSARSIPGFDLFKNLSECRDILPHFGGHPMAAG
MTLKLEDVDGLRFRLNELAAGQMRDEDFIPVMQLDAEISISEVNLSVLEEVLLLAPFGMD
NPKPKISIEDVSISTLRRIGSDSSHLKMTLSNGEASLDGIGFGLGPLADHISPSSKIAVA
GELSINEWNNIRKPQLMLQDLAIRNWQLFDYRGARTISAINGKLPDGKKTFIVFHEENLA
EVEKQLGGNDILHIRTVEEASAARINGESIVFVDLPPSKEVIADLLDGKMPARIYAVFYQ
ETSDFFSTMPNRDHFKWYYAFLLKNSPFDIGRYGSQLARKKGWTKETIDFMSEVFFELEF
VTIKNGLISVLKPTSKRDLTESVAYQKKHAHFALERDLLYSSYEQLRSWFSEILAEPVEN
EEALKEWI
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaattcaagaacgagatggattgtccgcgaatccaacgaaagcactgcaaataaa
ttagcggcggagttaaatatatctcaccttgtttcctcaatgcttgttaaccgggggctg
gatactgttgaagccgcgcggccttttttatttggcggggaaaaatttcatgacccgttc
ctgctgaagggaatggatctggcggtctcgcgaatcaaaagggcgattgacagccaggag
ccggttttgatatatggcgattatgatgccgatggcgttagcagcaccacggtcttaatg
attacgttacaagagttgggcgcgaacgtcggctattacatacctgacaggtttacagaa
ggatacggaccgaatgaagctgccttcaggaaagcggcggaaaatggagttaagctaatt
atcacagtggatactggtatttccggcgtccatgaagcggaagttgccagggaacttggt
gtcgatttaattattacggatcatcacgaaccagggcccgttcttccggatgcgcttgcc
atcatccatccaaaactaccggacagcatttacccgttcagggaccttgctggtgtcggc
gttgctttcaagctcgctcatgccctgtacggccaggtaccggatcatctgcttgaaatc
gccgctatcggtaccattgccgaccttgtttccctgaaaggggaaaacaggctgattgcc
aaagcgggaattgacaggctcaaggtaaccgaaaacatcggaatcaaggcaatcttaaaa
tgcgccggggttaatccgtcggcaataaacgaagaaacaatcggttttacacttgctcca
agaatcaatgctgtcggcaggctcgagcatgcgagcatggccgttaaactgctgttgacg
gaagatagaacggaagcggatgtgcttgctcaggaaatggacgggcttaatcgggaacgg
caggcaattgtccaggaaattacggaagaagcaatcctccaggtcgatcgtgactttccg
cctgatgagaataaagtgcttgttgtcggtaaggaaggctggaatgcgggggttattgga
attgtcgcgtccaggcttgtcgaaaagtattacaggcctgtaattgtccttagttatgat
atagaaaaaggccttgcgaaaggttctgcaaggagcattcccggttttgacctcttcaaa
aacttgtcggaatgcagggatatccttcctcatttcggtggacacccgatggcagccgga
atgacattgaaacttgaagacgtcgatggcttgcgctttcggctaaacgaactagcggcg
ggacagatgagagacgaagacttcatccctgtgatgcagcttgatgcggaaatttcaatt
tcagaggtgaatctctcagtccttgaggaggtgcttttgctcgcaccgtttgggatggac
aaccctaaaccaaaaatttcgattgaggacgtatctatctccacacttcgaaggattggg
agcgacagtagccatttaaagatgacattgtcgaacggggaagcttcgcttgacggcatc
ggatttgggctcgggccgttggcggaccacatttctccttcttcaaaaattgccgtcgcg
ggggagctgtccattaatgaatggaacaatatccgaaagccccagctaatgcttcaagac
cttgccatcaggaactggcaactgtttgattataggggtgcaaggactatttccgctata
aacggaaagcttccggatggtaaaaaaacgtttatcgtttttcatgaggaaaatctggcg
gaggttgaaaagcagctgggaggaaacgacattctccatatccggacagttgaagaagcc
agcgcagccaggataaacggtgaaagcatcgtctttgttgacctaccgccttcgaaggag
gttatcgctgacctgctggacggtaaaatgcccgcaaggatttacgcggtattttaccaa
gaaacaagcgattttttcagcacaatgccgaatagggatcatttcaaatggtactacgcc
ttcctgctgaaaaactccccgtttgatatcggccgttatggcagccagcttgctaggaaa
aaaggctggacaaaagagacgattgattttatgtccgaggtgttttttgagctggagttt
gttacaataaaaaatggattgatttccgttttaaagccaacatcaaagcgtgatctgacc
gagtcggttgcgtaccaaaagaagcatgcacatttcgctcttgaaagggatttgctctac
tcatcctatgagcagcttaggagttggttctccgaaatcctggcggagcccgttgaaaat
gaggaggcactaaaggaatggatttaa
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integrated database retrieval system
