Neobacillus oceani: V1499_21780
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Entry
V1499_21780 CDS
T11220
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
noce Neobacillus oceani
Pathway
noce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
noce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V1499_21780 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noce03021
]
V1499_21780 (rpoE)
03400 DNA repair and recombination proteins [BR:
noce03400
]
V1499_21780 (rpoE)
Transcription machinery [BR:
noce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V1499_21780 (rpoE)
DNA repair and recombination proteins [BR:
noce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V1499_21780 (rpoE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
GDH2_N
Motif
Other DBs
NCBI-ProteinID:
XOL51019
LinkDB
All DBs
Position
complement(4336827..4337459)
Genome browser
AA seq
210 aa
AA seq
DB search
MLGLEQYSKEQLKELSLIEMAYELLKSKKQQVSFNELLDEIAAAGDISANEIKARMAQFY
TDLNIDGRFISLGENKWGLRVWYPVDTVEEEQVAAVKPKKKKAKKIIDELEDYEELDDDL
DYDDLEEFEEEDVLDDEEDAFDELEEAEEFEEDDEDFDIAEDEALDEDLEDDLDEELDEE
LDEDLDDDLEESLEALEEEELSDDEDDEDL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtttagaacaatactcaaaagagcagttaaaggaattgtctttgattgaaatg
gcctatgagttgctgaaaagtaaaaaacagcaagtatcatttaatgagctgcttgatgaa
attgcggccgctggggatatttcagcaaatgaaatcaaggcgaggatggcgcaattttac
accgatttgaacatagatgggcgttttatcagccttggcgaaaacaaatggggccttcgt
gtctggtatccggttgatacggttgaagaagagcaggtggccgctgttaagccgaagaag
aaaaaggcgaagaaaatcattgatgaactcgaagattacgaagagcttgacgatgatctc
gattacgatgatcttgaagaattcgaggaagaggatgtccttgatgacgaagaagatgcc
ttcgacgaacttgaagaagccgaggaattcgaggaagatgatgaagattttgacattgcg
gaagatgaagcccttgacgaggacctcgaagatgacttggatgaggaacttgacgaggag
cttgatgaggatttggatgatgaccttgaggaaagccttgaggcattagaggaagaagag
ctgagcgatgatgaggatgacgaagacctgtag
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