Nocardioides sp. LMS-CY: KM427_00030
Help
Entry
KM427_00030 CDS
T10875
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nocl Nocardioides sp. LMS-CY
Brite
Enzymes [BR:
nocl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KM427_00030 (gyrB)
DNA replication proteins [BR:
nocl03032
]
Prokaryotic type
DNA Topoisomerases
KM427_00030 (gyrB)
DNA repair and recombination proteins [BR:
nocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KM427_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QWF22187
LinkDB
All DBs
Position
6038..8134
Genome browser
AA seq
698 aa
AA seq
DB search
MSDVHPAEPDETAGPAHRVDTDYDASAIQVLEGLEAVRKRPGMYIGSTGERGLHHLIWEI
VDNAVDEALAGYCDRIVVTLLADGGIRVEDNGRGIPTGTAPGQDLPALTLALTVLHAGGK
FGGGGYKVSGGLHGVGVSVVNALSTRLVAEVKNRDHLWRQTFTVGVPDGDLEQVRPMADG
ERTGTTITFWASPDIFETTTYSLETITARIREYAFLNKGLEIVVRDERPQADEIADAVED
DTVAADVDQQRADSIKRAETGGIEQIFRYDRGLVDYVEYINRKKQAANPSIISFEAETPD
TVENHMSLEIAMQWNTSYTESVHTFANTINTHEGGTHEEGFRAALTSLVNNWGFEWGLMK
KQEDRVSGDDIREGLTAIISIKLGEPQFEGQTKTKLGNTEAKGFVQRVVNDQLGAWLEQN
PGEGKDIIRRAQAAATARIAARKARDLARNRKGLLGSGSLPGKLADCQSTNPAECEVFIV
EGDSAGGSAKSGRDPRVQAILPIRGKILNVEKARIDKVLGNQEVQAIISALGTGIHEEFD
IDKLRYHKVVLMADADVDGHHINTLLLTLLFRFMKPLIEGGYVYMAQPPLYRLRWNKPAE
HEFVYSDAERDAMLRAGQEAGKKLPKDNPVQRYKGLGEMNADELWETTMDPDQRLMLQVT
LDDAAHADEIFSILMGEDVEQRRSFIQRNAKDVRFLDI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgtccaccccgccgagcccgacgagaccgcaggcccggcgcaccgggtcgac
accgactacgacgcttccgcgatccaggtcctcgaaggcctcgaggcggtccgcaagcgt
cccggcatgtacatcggctcgaccggggagcgcggcctccaccacctgatctgggagatc
gtcgacaacgcggtcgacgaggcgctcgcgggctactgcgaccggatcgtcgtcaccctg
ctcgccgacggtggcatccgggtcgaggacaacggccgcggcatcccgaccgggaccgcg
ccggggcaggacctgccggcgctgaccctggcgctgaccgtgctgcacgccggcggcaag
ttcggcggcggtggctacaaggtgtccggcggcctgcacggcgtcggcgtctcggtcgtc
aacgcgctctccaccaggctggtcgccgaggtcaagaaccgcgaccacctgtggcggcag
accttcacggtcggtgtgcccgacggtgacctcgaacaggtccggccgatggcggacggc
gagcgcaccggcaccacgatcactttctgggcctcgcccgacatcttcgagaccacgacg
tactccctggagacgatcaccgcgcggatccgcgagtacgccttcctcaacaagggcctc
gagatcgtcgtgcgcgacgagcggccgcaggccgacgagatcgcggacgccgtcgaggac
gacaccgtcgccgccgacgtcgaccagcagcgcgccgacagcatcaagcgcgccgagacc
ggcgggatcgagcagatcttccgctacgaccgcggcctggtcgactacgtcgagtacatc
aaccgcaagaagcaggcggcgaacccgtcgatcatctcgttcgaggcggagacccccgac
accgtcgagaaccacatgagcctcgagatcgcgatgcagtggaacacgtcgtacaccgag
tcggtgcacaccttcgcgaacaccatcaacacccacgagggcggcacccatgaggagggc
ttccgcgcggcgctcacctcgctggtcaacaactggggcttcgagtggggcctgatgaag
aagcaggaggaccgggtctcgggtgacgacatccgggagggcctgaccgcgatcatctcg
atcaagctcggcgagccgcagttcgaggggcagaccaagaccaagctcggcaacaccgag
gccaagggcttcgtgcagcgcgtcgtcaacgaccagctcggtgcctggctggagcagaac
cccggcgagggcaaggacatcatccggcgggcccaggcggcggcgaccgcacgcatcgcc
gcgcgcaaggcgcgcgacctggcccgcaaccgcaagggcctgctcggcagcgggagcctg
cccggcaagctcgccgactgccagtcgaccaaccccgccgagtgcgaggtcttcatcgtc
gagggcgactccgcgggcggctcggccaagtccggccgcgacccgcgggtccaggcgatc
ctgccgatccgcggcaagatcctgaacgtcgagaaggcccgcatcgacaaggtcctgggc
aaccaggaggtgcaggcgatcatctccgcgctcggcaccggcatccacgaagagttcgac
atcgacaagctgcgctaccacaaggtggtgctgatggccgatgccgacgtcgacggccac
cacatcaacacgctgctgctgacgctgctgttccgattcatgaagccgctgatcgagggc
ggctacgtctacatggcccagcccccgctctaccggctgcgctggaacaagccggccgag
cacgagttcgtctactccgacgccgagcgcgacgcgatgctgcgcgccgggcaggaggcc
ggcaagaagctgccgaaggacaacccggtccagcgctacaagggtctcggcgagatgaac
gccgacgagctgtgggagaccacgatggaccccgaccagcggctgatgctgcaggtcacc
ctcgacgacgcggcccacgcggacgagatcttctcgatcctgatgggcgaggacgtcgag
cagcggcgctcgttcatccagcgcaacgccaaggacgtccgattcctggatatctag
DBGET
integrated database retrieval system
