Nocardioides sp. LMS-CY: KM427_00575
Help
Entry
KM427_00575 CDS
T10875
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
nocl Nocardioides sp. LMS-CY
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
QWF22283
LinkDB
All DBs
Position
114764..118036
Genome browser
AA seq
1090 aa
AA seq
DB search
MTTRTYPTLGQRLTGLAASVAVLGILVGLPALFLAIGASPIPHQVPTLDTIKNALLAPDD
GTLVLGLFKLIGWAAWAFMALSLVVEAIARLRRVQAPQLPGLRLPQAGARNLIGLAALLF
IAAPIAAQAATATAASAAAPAAVGHVHAGAANQAASQQTVSVEAKQGPKQAKTIDHEVKP
GESLWSIAEDHLGDGARYKEIAELNRDLLGGQPGFLEPGWVLKLPAPRAKNAPAHQYGVQ
PGDTLSQIAQEQLGDADRWPEIYQASTGITQPGGAQLTDPNVIDVGWKLNIPGTEPGRSH
NDTDHQQPREVEPETPTTPEDQQSVDPPAEEEPPAARESEAPETAAPDAAPSQAEDPAAP
TAGDQVDDNVDEADDSNLDAPWVLAGLTGGGVLLSGALLMALRSRRRAGYRNRPPGRAIA
APPPELAPVEMTLNATGAAAAATVEFADEALRRLAAAVGAQGGTMPPLAAGELAHGKLTL
HLSAPAAMPAPWVGSPDQTHWHVSTDTDVDELGPATDNVEPPYPLLATIGMSDTGETWLL
NCEELSTLTISGDPTYGRDFARHLAAQLAVNPWSRRVQVDCIGVAEETVAMDERISYYPT
GAAGSPATAEVLAAAVTTVDRAKRHGTDVSTARTGSVDDDTWPARMLLVDAAAGDPDDLE
QLLQLVNDHVGESATSIVVAGERPNTPGAVLHMTNTGRVVLEHAGLNLIAVGLTSDEARG
CALVYAQSETPEYIDTPVDEDATDGWEAYTDSSGALRREYTLPRNTPDGAVDEPLSSLLE
GDDEDYIRTSPVVKEDLDALAPKVPEHVRAEVEKEDPDLDQDIADWFSADCKRPRLTLLG
PVTARAYGKPLAKRKDYFIELLAYLALHRKTGATREQIEEAFTISDGKVRDYTNIVRDWL
GTNPRTGEKHLPYADKAPAKKLTGVNVYQVDDGLLVDLDLFKRLRKRGQARGGAEGLADL
CTAFELVGEAPPFSQKRVDGWEWLIKENNRVDQMAPRWIADVALIVVTEALAAGDLVKAR
SAAYVANRADPDGESTRLCLAHVMKAEGDQLEADRILREEICNRSDDGEAPMELSERTKT
IISTHGWLAS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcgcacctaccccacactgggccagcggctcaccggcctcgcagcctcggtc
gccgtgctcggcatcctcgtcggactccctgctctgttcctcgccatcggcgccagcccg
atcccccaccaggtgccgaccctggacaccatcaagaacgcgctcctggcacccgacgac
ggaacgctcgtcctcggcctgttcaagttgatcggctgggccgcgtgggccttcatggcg
ctcagcctcgttgtggaggccatcgcccggctccgcagggtccaggcaccccaactgccg
ggcctccgactcccgcaggccggcgcccgcaacttgatcggactcgcggccctgttgttc
atcgccgcacccatcgccgcgcaggcagccaccgccaccgccgccagcgccgccgccccg
gcggccgtgggccacgtccacgccggcgccgccaaccaggcggccagtcagcagacggtg
agcgtcgaagcgaagcaggggccgaagcaggccaagacgatcgaccacgaggtgaagccg
ggggagagcctgtggtcgatcgcggaggaccacctgggcgacggagcccggtacaaggag
atcgccgagctcaaccgcgacctcctgggcggtcagccgggcttcctcgagcccggctgg
gtgctcaaactgcctgcgcctcgggcgaagaacgctccggcgcaccagtacggggtgcag
cccggcgacaccctcagtcagatcgcgcaggagcagctcggtgacgccgaccggtggccc
gagatctaccaggcttcgaccggcatcacccagcccggcggcgcccagctgaccgacccc
aacgtgatcgacgtcggctggaagctcaacatccccggcaccgagcccggccgcagccac
aacgacaccgaccaccagcagccgcgcgaggtcgagccggagacgcccaccacccccgag
gaccagcagtccgtcgacccgccggccgaggaagagccgccggccgcacgagagtccgag
gcccccgagacggccgctcccgacgccgctccgtcccaggccgaggacccggcggcgccg
accgccggcgaccaggtcgacgacaacgttgatgaggccgacgactcgaatctggatgcg
ccatgggtcctcgccggtctcaccggcgggggtgtcctgctctccggggcactgctcatg
gccctgcggtcccgtcgacgggccggctaccggaaccgtccgcccggccgcgcgatcgcc
gccccgcctcccgagctcgcgccggtcgagatgactctgaacgcgacgggcgcggccgcg
gcggccaccgtggagttcgccgacgaggccctgcgccgcctcgcggccgcggtcggagcc
cagggcggcaccatgccgccgctcgcggccggcgagctcgcacacggcaagctgaccctg
cacctgagcgcgccagccgccatgccggcaccgtgggtgggcagccccgaccagacccac
tggcacgtcagcacggacaccgacgtcgacgagctcggccccgccaccgacaacgtggag
ccgccctacccgctgctggccaccatcggcatgagcgacaccggcgagacctggctgctg
aactgcgaggagctctccacgctcaccatcagcggagacccgacctacggccgcgacttc
gcccgccacctcgccgcacagctggccgtcaacccgtggtcgcgccgtgtccaggtcgac
tgcatcggcgtggccgaggagaccgtcgccatggacgagcggatcagctactacccgacc
ggagcagccggaagccccgcgaccgccgaagtcctcgcggccgccgtcaccacggtcgac
cgggccaagcgccacggcaccgacgtgtccacggcccgcacaggcagcgtcgacgacgac
acctggccggcccgcatgctgctggtcgacgccgcggccggagaccccgacgacctcgag
cagctgctgcagctggtcaacgaccacgtcggcgagtccgcaacctccatcgtcgtcgcc
ggcgaacgccccaacacccccggcgcggtgctgcacatgaccaacaccggccgcgtcgtc
ctcgagcacgccggcctcaacctcatcgccgtcggcctcaccagcgacgaggcccggggc
tgcgcattggtctacgcccagagcgagacccccgagtacatcgacacccccgtcgacgag
gacgccaccgacggctgggaggcctacaccgactcctccggagccctgcgccgcgagtac
acgctcccccgcaacaccccggacggcgccgtcgacgagccactgtcctccctcctcgag
ggcgacgacgaggactacatccgcacgagcccggtcgtgaaggaggacctcgacgcgctc
gcacccaaggtgcccgaacacgtccgggccgaggtcgagaaggaggaccccgacctcgac
caggacatcgccgactggttctcagccgactgcaagcggcccaggctcaccctgctcggc
cccgtcaccgcacgcgcctacggcaagccgctggccaagcgcaaggactacttcatcgag
ctcctggcctacctcgcgctccaccgcaagaccggggctactcgcgagcagatcgaggag
gccttcaccatctccgacggcaaggtccgcgactacaccaacatcgtccgcgactggctc
ggcaccaacccgcgcaccggcgagaagcaccttccctacgccgataaggcaccagccaag
aagctcaccggggtgaacgtgtaccaggtcgacgacggcctgctcgtcgacctcgacctg
ttcaagcggctccgcaagcgcggccaggcgcgcggcggcgccgaaggtctcgccgacctg
tgcaccgccttcgagctcgtgggagaagcgccgccgttcagccagaagcgggtagacggc
tgggagtggttgatcaaggagaacaaccgcgtcgatcagatggccccccgatggatcgcc
gacgtcgcgctcatcgtcgtcaccgaggcactcgcggccggcgatctggtcaaggcccgc
tccgccgcctacgtcgccaaccgggccgaccccgacggcgagagcacccgcctgtgcctg
gcccacgtcatgaaggccgaaggtgaccagctcgaagccgaccggatcctgcgggaggag
atctgcaaccggtccgacgacggcgaggcacccatggaactgtcggagcgcacgaagacc
atcatcagtactcacggctggctggcgagctga
DBGET
integrated database retrieval system
