Nocardioides sp. LMS-CY: KM427_00730
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Entry
KM427_00730 CDS
T10875
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl00750
Vitamin B6 metabolism
nocl01100
Metabolic pathways
nocl01240
Biosynthesis of cofactors
Module
nocl_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
KM427_00730 (pdxS)
Enzymes [BR:
nocl01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
KM427_00730 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
NMO
TetR_C_27
Glu_synthase
DHO_dh
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
QWF22313
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Position
151896..152813
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AA seq
305 aa
AA seq
DB search
MAQTLDNQLPPPDRHGTTRVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVP
SDIRAQGGVSRMSDPDMIDGIISAVSIPVMAKARIGHFAEAQVLQSLGVDYVDESEVLTP
ADYGNHIDKWAFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNAVTHMRTIRR
EIRRLGALEGDELYVAAKELQAPYDLVKEVAEAGKLSVVLFTAGGIATPADAAMMMQLGA
EGVFVGSGIFKSGNPAQRAEAIVKATTFFDDPEMVAKVSRGLGEAMVGISVDDIPVPHRL
AQRGW
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaactctcgacaaccaacttccccctcccgaccgtcacggcaccacgcgcgtg
aagcgcgggatggccgagatgctcaagggcggcgtgatcatggacgtcgtcacgcccgag
caggcgaagatcgccgaggacgccggcgcggtcgcggtgatggcgctggagcgggtgccg
tccgacatccgggcgcagggcggggtgtcgcggatgagcgacccggacatgatcgacggc
atcatctccgcggtctcgatcccggtgatggcgaaggcccggatcggtcacttcgccgag
gcccaggtgctgcagagcctcggtgtggactacgtcgacgagtcggaggtgctgaccccg
gccgactacgggaaccacatcgacaagtgggcgttcacggtgccgttcgtgtgtggtgcg
accaacctgggtgaggcgctgcggcggatcaccgagggtgcggcgatgatccgctccaag
ggtgaggcgggcaccggcgacgtctcgaacgcggtgacgcacatgcgcacgatccgccgg
gagatccggcgcctcggtgcgctggagggcgatgagctctacgtcgcggcgaaggagctg
caggcgccgtacgacctggtcaaggaggtcgcggaggcgggcaagctgtcggtggtgctg
ttcaccgcgggcgggatcgcgacccccgcggatgcggcgatgatgatgcagctcggggcc
gagggcgtgttcgtgggctcgggcatcttcaagtcgggcaacccggcgcagcgggccgag
gcgatcgtcaaggccacgacgttcttcgacgaccccgagatggtcgccaaggtctcccgc
ggcctgggcgaggccatggtcggcatcagcgtggacgacatcccggtgccgcaccgcctc
gcccagcgcggctggtga
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