Nocardioides sp. LMS-CY: KM427_02275
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Entry
KM427_02275 CDS
T10875
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KM427_02275 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocl03400
]
KM427_02275 (recC)
Enzymes [BR:
nocl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KM427_02275 (recC)
DNA repair and recombination proteins [BR:
nocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KM427_02275 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QWF22596
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All DBs
Position
469995..473288
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AA seq
1097 aa
AA seq
DB search
MPLQIHRAARTDVLADRLGDLLAAPLDDPFAEEVVVVPAKGVERWLTQRLSHRLGAGPRG
GDGVCAGVRFLNPRSLVSLLLGRERDDPWDPERLVWPLLATIDESLDDPRFETLARHLGH
GREGPDQELRRNRRYSVAIRLAHLYASYAVQRPGLVTAWRQGDDGDLADDLRWQAELWRR
LLEKVAAPPPDVRHAETCAALEEGGADLPLPGRLSLFGHTRIPVTEVALLRALGEHRDVH
LFLPQPSPTLWDDLNGLGGVVSRDEDASSERVGHPLLASLGRDARELRRTLDGIDAELVP
APEGDPATLLGWLQHDLRANHAPSYDERAGRLLDAADTSLQVHACHGPARQVDVLREVLV
GLLQDDPTLEPRDILVMCPDIESYAPLISAGFGLATSQGPATRGHPAHLLRVKLADRALT
STNPLLAVAGRLLELSGGRVTAADVLDLAGSEPCRLRFGFTDDELDRVSRWVARAGVRWG
LDEDSRRAFQMERFPHNTWRMGLDRILLGVAMSGDDHRHLGRGLPLDDIGSSEIDLAGRL
AELVERLDATLTGLAGARTVADWSARLRDGVRSLTDVDADDAWQLPQFERELARAAASSH
EGEVELRLSDVRAMLQSRLAGRPTRANFRTGTLTVATLVPMRSVPHRVVCLIGLDDGVFP
RAGAVDGDDVLGRRPLTGERDARSEDRQLLLDAVLAATERLVITYSGADEQSGARRPPAV
PLGEILDAADRTTAAPVRDRVETRHPLQPYDARNFAPERPFSFDAAALAGARSAWSVRRE
PPPLLTGPLPPRPREDVSLQDLKAFLAHPVRTFLRERLDVATPFEPDDLADAIPVALDSL
EKWQVGDRLLRELLAGQDPVAVMTAEQLAGTLPPGGLGRAALNEVVEECQRLWARTVDVR
QGERRSVDVDVDLGDGRRLTGTVPGVYGSRVVSLGYSRLNYRQRLQAWADLLALSASYPD
QHWTAHAIGRERAGPKRAISGPLDHRAVGWLRDLVDLRERGLREPLPVPVKSAGAWAEAH
ARELMGQDLSPAEAAGREWETDPHNMLGISGEDDDSYHQRVFGARAPVRVLLDAGLPEHA
WRIWEPLLTGAEKVGPL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctgcagatccaccgagccgcccgcaccgacgtgctggccgaccgcctcggtgac
ctgctggccgcaccgctcgacgatccgttcgccgaggaggtcgtggtggtgccggccaag
ggcgtggagcggtggctcacccagcggctcagccaccggctcggcgcgggtccgcgcggg
ggcgacggggtgtgcgcgggggtgcggttcctcaacccgcgcagcctggtcagcctgctg
ctcggccgcgagcgcgacgacccgtgggaccccgagcggctggtctggccgctgctcgcg
acgatcgacgagagcctcgacgacccgcggttcgagaccctcgccagacatctcggccac
ggtcgggagggcccggaccaggagctgcgccgcaaccgtcgctactcggtcgcgatccgg
ctggcgcacctctacgcgtcgtacgccgtacagcgacccggtctggtcaccgcctggcgc
cagggagacgacggtgacctcgccgacgacctgcgctggcaggcggagctgtggcggcgg
ctcctcgagaaggtggccgccccaccgcccgacgtccggcacgccgagacctgtgcggcg
ctggaggagggcggggccgacctgccgctgccggggcggctgagcctcttcgggcacacc
cgcatccccgtcaccgaggtggcgctgctgcgggcgctcggggagcaccgcgacgtccac
ctcttcctcccgcagccgtcgccgacgctctgggacgacctgaacgggctcggcggcgtc
gtgtcgcgcgacgaggacgcctcgtccgaacgcgtcgggcacccgctgctcgcctcgctc
ggccgcgacgcccgcgagctgcgccgcacgctcgacggcatcgacgccgagctcgtgccg
gcgcccgagggtgacccggccacgctgctcggctggctccagcacgacttgcgcgccaac
catgctccgtcgtacgacgagcgcgccggccgcctcctcgacgccgccgacaccagcctg
caggtgcacgcctgccacggcccggcccgccaggtcgacgtgctgcgcgaggtgctggtc
gggctgctccaggacgaccccaccctcgagccgcgcgacatcctcgtgatgtgccccgac
atcgagtcctacgcgccgctgatctcagccgggttcggcctcgcgacgagccagggcccc
gcgacgcgggggcaccccgcgcacctgctccgggtcaagctggccgaccgcgcgttgacc
agcaccaacccgctgctcgccgtggccggccggctcctcgagctctcgggtggtcgggtc
acggccgccgatgtgctcgacctggccggcagcgagccctgtcgcctgaggttcggcttc
accgacgacgagctcgaccgggtcagccgctgggtcgcccgcgccggggtgcgctggggc
ctcgacgaggactcccgcagggcgttccagatggagcgcttcccccacaacacctggcgg
atgggcctcgaccggatcctgctgggcgtcgccatgagcggcgacgaccaccgtcatctc
ggtcgcggcctgccgctcgacgacatcggcagcagcgagatcgacctcgccggccggctc
gccgaactggtcgagcgactcgacgcgacgctgaccgggctggccggcgcgcggaccgtc
gccgactggtcggcccggctgcgcgacggcgtacggtcgctcaccgacgtcgacgccgac
gacgcctggcagctgccgcagttcgagcgcgagctggcccgcgccgccgcctcgtcccac
gagggcgaggtcgagctgcggctctccgacgtgcgcgcgatgctccagtcccgcctggcc
ggccgcccgacccgcgccaacttccgcaccggcacgctcacggtcgccacgttggtgccg
atgcgctcggtgccgcaccgcgtcgtgtgcctgatcggcctcgacgacggcgtgttcccc
cgtgccggagcggtcgacggcgacgacgtgctcggccggcggccgctgaccggcgagcgg
gacgcccgcagcgaggaccgccagctcctcctcgacgccgtgctggccgcgaccgagcgc
ctcgtcatcacctacagcggtgccgacgagcagtccggcgcgcgccgcccgcccgccgta
cccctcggcgagatcctcgacgccgccgatcgcaccaccgccgcaccggtgcgcgaccgc
gtcgagacccggcacccgctccagccgtacgacgcacgcaacttcgccccggagcgaccg
ttcagcttcgatgccgccgcactggccggtgcacgctcggcgtggagcgtccgccgcgag
cccccgccgctgctcaccggcccgctgcccccgcgacctcgcgaggacgtgtcgctgcag
gacctcaaggcgttcctcgcccacccggtgcgcaccttcctgcgcgagcggctcgacgtg
gcgaccccgttcgagcccgacgacctcgccgacgcgatcccggtggcgctcgacagcctg
gagaagtggcaggtcggcgatcggctgctgcgcgagctgctcgccgggcaggacccggtc
gcggtgatgaccgccgagcagctcgccggcaccctcccgccgggcggcctcggccgggcc
gcgctcaacgaggtcgtcgaggagtgccagcggctctgggctcgcacggtcgacgtgcgc
cagggcgagcgccggtccgtcgacgtcgacgtcgacctcggcgacggccgccggctcacc
ggcacggtgcccggcgtctacggcagccgggtggtctcgctgggctactcgcggctcaac
taccggcagcggctgcaggcctgggccgacctgctggcgctcagcgcgtcgtaccccgac
cagcactggaccgcccacgccatcggccgcgagcgagccggcccgaagcgcgcgatctcc
ggtcccctcgaccaccgcgccgtcggctggctgcgcgacctcgtcgacctgcgcgagcgc
gggctgcgcgagccgctgccggtgccggtcaagagcgccggggcctgggccgaggcgcac
gcgcgcgagctgatgggccaggacctctcgcccgccgaggccgcgggccgggagtgggag
accgatccacacaacatgttgggcatctccggcgaggatgacgactcttaccaccagcgg
gtcttcggtgcccgggctccggtgcgggtactgctcgacgccgggctgcccgagcacgcc
tggcggatctgggagccgctgctcaccggcgccgagaaggtgggcccgctgtga
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