Nocardioides sp. LMS-CY: KM427_02285
Help
Entry
KM427_02285 CDS
T10875
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KM427_02285 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocl03400
]
KM427_02285 (recD)
Enzymes [BR:
nocl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KM427_02285 (recD)
DNA repair and recombination proteins [BR:
nocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KM427_02285 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
Viral_helicase1
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
SH3_13
PhoH
AAA_28
Mg_chelatase
AAA_16
nSTAND3
NTPase_1
NACHT
AAA_5
Herpes_Helicase
AAA_29
TrwB_AAD_bind
T2SSE
LvrA_C
SLFN-g3_helicase
SRP54
AAA_7
ATPase
Motif
Other DBs
NCBI-ProteinID:
QWF22597
LinkDB
All DBs
Position
476657..478468
Genome browser
AA seq
603 aa
AA seq
DB search
MTEPFETPRPSAPQEPLFEPTGEHDWRIATGATGLLATYNAAGVLTSSDLHVATRMGALG
DEDDERVLLAVALAVRAVRRGSVCLDLATVAETAPDLDWPDPAAWVAAIEASPLVAAGAV
RWELGLLYLDRYHRLETQVHDDLEARLALAPPAVDEARLEAALARVEAGHFSAEQRAAVV
ATVHRRTTILTGGPGTGKTTTVARLLALLADQAAGEGGRLAIALAAPTGKAATRLQEAVV
SELGAVAESWPEAPGLVGRLDGLTLHRLLGWRPDNATRFRHDRGNRLKYDVVVVDESSMV
ELTMMGRLLEALRPECRLVLVGDPRQLTSVGAGAVLSDLVAGYDARPDSPVSALTTNFRS
EQDIKSLADALRTGDADAVLGALRAPSEQVSWIETSDEAEVEAALRPESLAAARAVWEAA
SAEDPARALEELDRYRLLCAHREGPYGVRRWNQRVERWLGEDPDVEVYGPWYVGRPLLVT
SNDYALDVYNGETGVVVRQGARRRAFVAGSERLKEFAPGRLDAVETMHAMTIHKSQGSQA
DRVTVLLPEEGSRLLTLELFYTAVTRARHHVRVVGSEAAVRAAVATRAQRATGLRLRLAA
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcccttcgagacgcctcgtccctcggctcctcaggaaccactgttcgagccg
accggcgagcacgactggcggatcgcgaccggggcgaccgggctgctcgcgacgtacaac
gccgccggggtgctcacctcctccgacctccacgtcgcgacccggatgggcgcgctcggc
gacgaggacgacgagcgggtgttgctcgcggtggcgctcgcggtgcgcgccgtacgccgt
gggtcggtctgcctcgacctcgccaccgtcgccgagaccgcgcccgacctcgactggccc
gacccggccgcctgggtggccgccatcgaggcgtcgccgctggtggccgccggcgccgtc
cgctgggagctcgggctgctctacctcgaccgttaccaccggctcgagacccaggtccac
gacgacctcgaggcccggctcgccctggcgccacccgcggtcgacgaggcccggctggag
gccgcgctggcccgcgtcgaggcggggcacttcagcgcggagcagcgggcggccgtggtc
gcgaccgtgcaccggcggaccaccatcctcaccggtggccccggcaccgggaagacgacg
acggtcgcccggctgctggcgctgctggccgatcaggcggccggcgagggcgggcggctc
gcgatcgcgctcgccgccccgaccggcaaggccgccacccggctccaggaggccgtggtc
tccgagctcggcgcggtcgccgagtcgtggccggaggcgcccgggctcgtcgggcgtctc
gacggcctgaccctgcaccggctgctcggctggcggcccgacaacgcgacccgcttccgc
cacgaccgcggcaaccgcctgaagtacgacgtggtcgtggtcgacgagtcgtcgatggtc
gagctgacgatgatgggccgcctgctcgaggcgctgcgccccgagtgccggctcgtgctg
gtcggcgacccgcgccagctcacgtcggtcggcgccggcgcggtgctcagcgacctcgtg
gccggctacgacgcgcgccccgactccccggtgtcggcgctcaccaccaacttccgctcg
gagcaggacatcaagtcgctggccgacgcgctgcgcacgggcgacgccgacgcggtgctc
ggcgcgctccgggcgccgtccgagcaggtgtcctggatcgagacctccgacgaggccgag
gtcgaggccgccctgcggcccgagtcgctcgctgccgcgcgggcggtctgggaggccgcc
agcgccgaggaccccgcccgcgcgctcgaggagctcgaccgctaccggctgctctgtgcc
caccgcgagggcccctacggcgtgcgccgctggaaccagcgggtcgagcgctggctcggc
gaggaccccgacgtcgaggtctacggcccgtggtacgtcggccggccgctgctggtgacg
agcaacgactacgcgctcgacgtctacaacggcgagaccggcgtggtggtgcggcagggc
gcgcggcggcgggcgttcgtggcggggtcggagcggctcaaggagttcgcgcccggccgc
ctcgacgccgtcgagacgatgcacgcgatgaccatccacaagagccagggcagccaggcc
gaccgggtcacggtgctgctgcccgaggagggctcccggctgctcaccctcgagctgttc
tacacggcggtcacccgggcccggcaccacgtgcgggtggtcggctccgaggccgccgtc
cgcgccgcggtcgccacccgcgcgcagcgcgcgaccgggctccggctgcggctggcggcg
cccgcggagtga
DBGET
integrated database retrieval system
