Nocardioides sp. LMS-CY: KM427_02615
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Entry
KM427_02615 CDS
T10875
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl03030
DNA replication
nocl03430
Mismatch repair
nocl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KM427_02615
03430 Mismatch repair
KM427_02615
03440 Homologous recombination
KM427_02615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocl03032
]
KM427_02615
03400 DNA repair and recombination proteins [BR:
nocl03400
]
KM427_02615
Enzymes [BR:
nocl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KM427_02615
DNA replication proteins [BR:
nocl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KM427_02615
DNA repair and recombination proteins [BR:
nocl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KM427_02615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
AAA_14
Rad17
AAA_5
AAA_16
AAA_18
Mg_chelatase
TsaE
nSTAND3
AAA_28
zf-CXXC
RNA_helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
QWF22652
LinkDB
All DBs
Position
543648..545684
Genome browser
AA seq
678 aa
AA seq
DB search
MESPLALYRRYRPESFAEVIGQDHVTEPLRAALANNRVNHAYLFSGPRGCGKTTSARILA
RALNCERAPVADPCGECESCRDLARGGPGSIDVIEIDAASHGGVDDARDLREKAFFAPVK
SRYKVYIIDEAHMVTTQGFNALLKLVEEPPPHLRFIFATTEPDKVLPTIRSRTHHYPFRL
IPPRLLSSYLSELCDKEGVTLDPAALPLVVRAGGGSARDTLSVLDQLLGGAGSAGVTYEL
ATGLLGYTPDTLLDDVVDAFAAGDGAAVFGVVDRVIETGQDPRRFTEDLLRRLRDLVIVA
AVPDAPATGLIDVSEDQGERLVAQAARFGPAELSRAADIVASGLTEMRGATAPRLLLELL
CARVLLPGADHATDGVLARLDRLEKRLTISGGAPTPTSAPPAPPAQDRPVAPAHRPDAPD
PAAARPEPVAPPATEPAPVPEPVSEPVSGTTAEPAPAPEPVVEAPPEPAPTPAPAPAASG
SLSLVDVRRLWPDIVDATKLRRRLAWMHLTQNCQVVAVDGTTLTLGFANSGARDSFVSAG
CDDVLRQAAIDVVGAEWKIETIVDPGAQAEGTPAVTRSAVAEPAAAPPAPEPPPQQAPQQ
PPAEPAEPGGPSASAAAREAIQQTRSADHQPEPSGPDWASADADAHPDDLDADHQGMSAT
ELLQRELGAQMIEEIRHQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggagtcccctctcgcgctgtaccgccgctaccggcccgagtccttcgccgaggtcatc
ggccaggaccacgtgaccgagccgctgcgggccgcgctggcgaacaaccgggtcaaccac
gcctatctgttctccgggccgcgcggctgcggcaagaccaccagcgcccgcatcctggcg
cgtgcgctcaactgcgagcgggcgccggtggccgacccgtgcggggagtgcgagagctgc
cgcgacctggcccggggcggccccggctcgatcgacgtgatcgagatcgacgcggcctcc
cacggcggtgtcgacgacgcccgcgacctgcgcgagaaggccttcttcgcgccggtgaag
agccgctacaaggtctacatcatcgacgaggcccacatggtcacgacgcagggcttcaac
gccctgctcaagctcgtcgaggagcccccgccccacctgcgcttcatcttcgcgaccacc
gagcccgacaaggtgctgccgacgatccggtcgcgcacccatcactacccgttccggctg
atcccgccgcggctgctgtcgtcgtacctctccgagctgtgcgacaaggagggcgtcacc
ctcgacccggcggccctgcccctggtggtgcgcgccggtggcgggtcggcccgcgacacg
ctctcggtcctcgaccagctgctcggcggtgccggctcggcgggggtgacctacgagctc
gcgaccgggctgctcggctacacccccgacacgctgctcgacgacgtcgtcgacgccttc
gcggccggtgacggcgccgcggtcttcggcgtggtcgaccgggtgatcgagaccgggcag
gacccacgccggttcaccgaggacctgctgcgccggctgcgcgacctggtgatcgtcgcg
gccgtccccgacgcgcccgccaccgggctgatcgacgtctccgaggaccagggcgagcgg
ctggtcgcccaggcggcgcgcttcggcccggccgagctcagccgcgcggccgacatcgtc
gcgtccgggctcaccgagatgcggggcgcgaccgcgccgcggctgctgctcgagctcctc
tgcgcccgggtgctgctgccgggtgccgaccacgcgaccgacggtgtgctggcccggctc
gaccggctggagaagcggctgacgatcagcgggggcgcgcccacgccgacgtcggcaccg
cccgcgccgcccgctcaggaccggccggtggcacccgcccaccggccggacgcccccgac
ccggccgccgcgcgcccggagcccgtggccccaccggccaccgagcccgcccccgtgccc
gagcccgtgtccgagcccgtgtccggtacgacggccgagccggctcccgcgcccgagccg
gtcgtcgaggcgccacccgagcccgccccgacacccgcgccggcgccggcggcatcgggc
agcctgtcgctcgtcgacgtacgccggctgtggcccgacatcgtcgacgccaccaagctg
cgccgccgcctcgcctggatgcacctgacccagaactgccaggtggtcgcggtcgacggg
accaccctgaccctcggcttcgcgaactccggcgcccgcgactcgttcgtcagcgcgggc
tgcgacgacgtgctgcgccaggctgcgatcgacgtggtcggcgcggagtggaagatcgag
accatcgtcgaccccggtgcccaggccgagggcacgccggcggtgacccggtccgcggtc
gcggagccggccgcagcgccgcctgcgcccgagccgccaccccagcaggcgccccagcag
ccacccgccgagcccgccgaacccggcgggccgagtgccagcgctgccgcgcgggaggcg
atccagcagacccgctccgccgaccatcagcccgagccgtccggccccgactgggcctcg
gccgacgccgacgcccaccccgacgacctggacgccgatcaccagggcatgagcgccacc
gagctgctccagcgcgagctcggcgcccagatgatcgaggagatccgccaccagtga
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