Nocardioides sp. LMS-CY: KM427_06395
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Entry
KM427_06395 CDS
T10875
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl00300
Lysine biosynthesis
nocl00470
D-Amino acid metabolism
nocl01100
Metabolic pathways
nocl01110
Biosynthesis of secondary metabolites
nocl01120
Microbial metabolism in diverse environments
nocl01230
Biosynthesis of amino acids
Module
nocl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KM427_06395 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KM427_06395 (dapF)
Enzymes [BR:
nocl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KM427_06395 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
TetR_C_11
WW_TCERG1
Motif
Other DBs
NCBI-ProteinID:
QWF23349
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Position
1338056..1338874
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AA seq
272 aa
AA seq
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MPERYPFLKGHGTENDFVLLPDPDGSVHGELSPQRMAERVRALCDRRAGIGGDGVLRVVR
RDGGWFMDYRNSDGSVSEMCGNGIRVFARYLVDEGLADPSAPIPVGTRDGVKVLTVDGDL
ITADMGAPRVLGESKVAVPGHAWVARHVDMGNPHAVAFVESLDDAGTLLAAPDHDETTYP
HGVNVEFVVRRGDRHVAMRVHERGSGETRSCGTGACAVMVAAAVADGARPTDADVAYRVD
VPGGTLTVTWTTDDRVLLTGPAVIVARGTTGL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcgctatcccttcctcaagggccacggcacggagaacgacttcgtgctgctg
cctgaccccgacggctccgtgcacggcgagctgtcgccccagcggatggcggagcgggtg
cgcgcgctgtgcgaccgccgggccggcatcggcggcgacggggtgctgcgggtggtccgc
cgcgacggcggctggttcatggactaccgcaactccgacggctcggtctcggagatgtgc
ggcaacggcatccgggtcttcgcccgctacctggtcgacgagggtctcgccgacccctcg
gcgccgatcccggtgggcacccgcgacggcgtcaaggtgctgaccgtcgacggcgacctg
atcaccgccgacatgggcgccccgcgggtgctcggcgagtcgaaggtcgcggtgcccggc
cacgcctgggtggcgcgccacgtcgacatgggcaacccgcacgcggtggccttcgtcgag
tcgctggacgacgccggcaccctcctcgccgcgcccgaccacgacgagacgacgtacccg
cacggcgtgaacgtggagttcgtcgtacgccgcggggaccggcacgtcgcgatgcgggtg
cacgagcgcggctcgggggagacccgctcctgcggcaccggcgcctgcgcggtgatggtg
gccgccgccgtggccgacggtgcccgcccgaccgacgcggacgtcgcctaccgcgtcgac
gtccccggcggcaccctcaccgtcacctggaccaccgacgaccgggtgctgctcaccggc
cccgccgtgatcgtggcccggggcaccacgggcctctga
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