Nocardioides sp. LMS-CY: KM427_06685
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Entry
KM427_06685 CDS
T10875
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KM427_06685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocl03400
]
KM427_06685
Enzymes [BR:
nocl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
KM427_06685
DNA repair and recombination proteins [BR:
nocl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KM427_06685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QWF23404
LinkDB
All DBs
Position
complement(1397062..1397640)
Genome browser
AA seq
192 aa
AA seq
DB search
MARFTRAELESFRDAEVPDLLPGPDDPALRLLFVGINPGLWTAATQTHFAHPANRFYPAL
LLAGIITEPVSPSDGMIDADRDRLRARGIGITNIVRRATARASELSDDELRAGGLELVET
VRRTSPRVVAIAGVTAYRVAFGQRRAALGRQPEPIEGAELWVVPNPSGLNAHETAPTLAA
AYADAARAAGVL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgcttcacccgcgccgagctggagtccttccgcgacgcggaggtccccgacctg
ctgcccggccccgacgaccccgccctccggctgctcttcgtgggcatcaaccccggcctc
tggacggcggccacgcagacccacttcgcgcacccggccaaccgcttctacccggcgctg
ctgctcgccgggatcatcaccgagccggtcagcccgtcggacgggatgatcgacgccgac
cgcgaccggctgcgcgcccgcgggatcggcatcaccaacatcgtgcgccgcgcgaccgcc
cgggcgtcggagctctccgacgacgagctgcgcgcgggcgggctggagctggtggagacg
gtacgccgcacctcgccgcgggtggtcgcgatcgcgggcgtcacggcgtaccgggtcgcc
ttcgggcagcggcgcgccgcgctcggccgccagccggagccgatcgagggcgcggagctg
tgggtggtgccgaaccccagcgggctcaacgcgcacgagaccgcccccacgctggccgcg
gcgtacgccgacgccgcccgggcggccggcgtcctctag
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