Nocardioides sp. LMS-CY: KM427_10300
Help
Entry
KM427_10300 CDS
T10875
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nocl Nocardioides sp. LMS-CY
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nocl03016
]
KM427_10300 (truB)
Enzymes [BR:
nocl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KM427_10300 (truB)
Transfer RNA biogenesis [BR:
nocl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KM427_10300 (truB)
Prokaryotic type
KM427_10300 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QWF24039
LinkDB
All DBs
Position
2129608..2130474
Genome browser
AA seq
288 aa
AA seq
DB search
MSESGAGSGLVVVDKAGGMTSHDVVSRVRRLAGTRKVGHAGTLDPMATGVLVLGVNRATR
LLGHLMLTEKAYDATIRLGVATSTDDAEGEVTATVATDGLDEAQVRAAAAEFVGDLLQVP
TAVSAIKVDGKRAYQRVRDGEQVELKARPVTVHELVVHAVRRDELDVSVRCSSGTYIRAI
ARDLGARLGVGGHLTSLRRTAVGPYALADARTLDELGDGFAMMPIAAAARAAFASVDLDE
RQAGDVRVGRAIDVDLAGLSAVFAPDGEFLALYEPKDGRARPVAVFTG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtccggcgctgggtccggcctggtcgtcgtcgacaaggccggaggcatgacg
tcgcacgacgtcgtgtcccgggtgcggcggctcgccggcacccggaaggtcggccacgcc
ggcacactcgacccgatggcgaccggggtgctggtgctcggcgtcaaccgggcgacccgg
ctgctcgggcacctgatgctgaccgagaaggcgtacgacgcgacgatccggctcggcgtg
gcgacgagcaccgacgacgccgagggcgaggtgaccgcgaccgtcgcgaccgacggcctc
gacgaggcgcaggtgcgagcggccgcggcggagttcgtcggcgacctgctgcaggtgccg
accgccgtctcggcgatcaaggtcgacggcaagcgggcctaccagcgggtgcgcgacggc
gagcaggtcgagctgaaggcgcggccggtcaccgtgcacgagctcgtggtgcacgcggtg
cggcgcgacgagctggacgtctcggtccgctgctccagcggcacctacatccgcgccatc
gcccgcgacctcggcgcccggctgggtgtcggggggcacctgacgtcgctgcggcgtacc
gccgtcggcccctacgcgctcgccgacgcccgcacgctcgacgagctcggcgacgggttc
gcgatgatgccgatcgcggccgccgcccgcgcggcgttcgcgtcggtcgacctcgacgag
cgccaggcgggcgacgtgcgggtcggccgggcgatcgacgtcgacctggcggggctctcg
gcggtgttcgcgccggacggggagttcctcgcgctctacgagccgaaggacggtcgggcc
cggcccgtcgcggtgttcaccgggtga
DBGET
integrated database retrieval system
