KEGG   Nocardioides sp. LMS-CY: KM427_11590
Entry
KM427_11590       CDS       T10875                                 
Name
(GenBank) type II secretion system F family protein
  KO
K12511  tight adherence protein C
Organism
nocl  Nocardioides sp. LMS-CY
Pathway
nocl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nocl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KM427_11590
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nocl02044]
    KM427_11590
Secretion system [BR:nocl02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   KM427_11590
SSDB
Motif
Pfam: T2SSF DUF5936
Other DBs
NCBI-ProteinID: QWF24271
LinkDB
Position
2403343..2404272
AA seq 309 aa
MSSFVMVGGGLLLLTGSVLAFVALGGLASDRRGVASSLAAIQVLGAAPEPVAMDPDPSFV
RRVLAPYAVRFAGLARRLTRSGAEARIQRRLDIAGNPTGWDVDRMLGVKVVAMGVLGGAA
LLYGLAVGVAPAPALAVAVVLALTGFLVPDLLLYNAGQKREALMRRALPDALDLMTISVE
AGLGFDAAVLKVARNTTGPLAQEFSRLLQEMQLGMGRMAAMRAMGDRSTIKELRSFCQAM
VQADQLGVPIGRVLRIQSKEMRVRRRQTAEEKAQKVPVKIMVPLVLCILPSLFLVVLGPA
ALKMMEAFG
NT seq 930 nt   +upstreamnt  +downstreamnt
atgtcctccttcgtgatggtcggcggtggcctgctgctgctcaccgggtcggtgctcgcc
ttcgtggcgctgggcggactggcgtccgaccggcgcggcgtggcgtcctccctcgccgcg
atccaggtgctgggggccgcgcccgagcccgtcgcgatggacccggacccgtcgttcgtg
cgccgcgtgctcgcgccgtacgccgtccggttcgccggcctggcccggcggctgacgcgg
tcgggggccgaggcgcggatccagcgccggctcgacatcgcgggcaacccgaccgggtgg
gacgtcgaccggatgctgggcgtcaaggtggtcgcgatgggcgtcctcggcggcgccgcg
ctgctctacggcctggccgtcggtgtcgcgccggcaccggccctcgcggtggcggtggtc
cttgcactgaccggtttcctggtcccggacctgctgctctacaacgccgggcagaagcgc
gaggcgctgatgcggcgggcgctgccggacgcgctcgacctgatgacgatctcggtcgag
gccggactcggcttcgacgcggcggtgctgaaggtcgcgcggaacaccaccggcccgctc
gcccaggagttctcccggctgctgcaggagatgcagctcggcatgggccggatggccgcg
atgcgcgcgatgggggaccgcagcacgatcaaggagctgcgctccttctgccaggcgatg
gtgcaggccgaccagctcggcgtgccgatcggccgggtgctgcgcatccagagcaaggag
atgcgggtgcgccgccgtcagaccgcggaggagaaggcgcagaaggtcccggtcaagatc
atggtcccgctcgtcctctgcatcctgccgagcctcttcctggtcgtgctcggcccggcg
gcgctgaagatgatggaggccttcggatga

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