Nocardioides sp. LMS-CY: KM427_12845
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Entry
KM427_12845 CDS
T10875
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl00260
Glycine, serine and threonine metabolism
nocl00630
Glyoxylate and dicarboxylate metabolism
nocl00670
One carbon pool by folate
nocl00785
Lipoic acid metabolism
nocl01100
Metabolic pathways
nocl01110
Biosynthesis of secondary metabolites
nocl01200
Carbon metabolism
Module
nocl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KM427_12845 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KM427_12845 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KM427_12845 (gcvP)
00670 One carbon pool by folate
KM427_12845 (gcvP)
Enzymes [BR:
nocl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
KM427_12845 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QWF24501
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Position
2660195..2663080
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AA seq
961 aa
AA seq
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MPDRPTLTDLDGALPFVERHIGLREADIASMLDRLGFDSLDALMDAAVPGAIRVAASLDL
PSPLSEEAAARELRAIAHANRPGEAMIGLGYHATITPPVVRRNVLEDPSWYTAYTPYQPE
ISQGRLEALLNFQTMVGDLAGLPTANASLLDEGTAAAEAMTLVRRAKKSAAGPFVVDADA
LPQTIDVVRTRAEAMGIEVVVADLTGGLPEGELCGVLVQYPGSSGRVLDPRPLIEQAHER
NALAVVGADLLALTLLESPGELGADVVVGSSQRFGVPLFYGGPHAGYMAVAAGLERHLPG
RLVGVSVDAEGRPAYRLALQTREQHIRRDKATSNICTAQVLLAVVASMYAVYHGPEGLRA
IATRTHRYAAVLAAALAEAGFPARHRQFFDTLTVAVPGRAHDVVTAARGLGLQLRLVDAD
HVGISTSELTTRSTIASVLKAFGVAVTDLDAVDAMTPDALPEQLRRGTPYLTHEVFSTHH
SETAMLRYLRRLSARDYALDRGMIPLGSCTMKLNATTEMEPISLPGFADLHPFVPAEDAT
GYRQLVDELEGLLAEVTGYDRVSIQPNAGSQGELAGLLAIRGYHRANGEAHRDVCLIPSS
AHGTNAASAVMAGMKVVVVKSGDGGEVDLADLRAQCEKHADDLAAIMVTYPSTHGAYEDT
ITELCRVVHDHGGQVYVDGANLNALLGYAKPGEFGGDVSHLNLHKTFCIPHGGGGPGVGP
VAVRAHLAPYLPSHAMHPEQAKREGIGPISAAPYGSAGILPISWAYVRLMGAAGLTRATA
VAVLSANYVATRLGEHYPVLYRGHGGLVAHECILDLRGLTKDTGVSVDDVAKRLIDYGFH
APTMSFPVAGTLMVEPTESEDLAEIDRFIDAMIAIRGEIDRVASGEWTPETSPLRGAPHT
SRALVGDWDRAYTREEAVFPTGVTGPNGAGDKYWPPVARIDQAYGDRNLVCACPPPEAFA
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaccgtcccaccctgaccgatctcgacggcgcgctgccgttcgtcgagcgccac
atcggcctccgcgaggccgacatcgcctcgatgctcgaccgcctcggcttcgactcgctc
gacgcgctgatggacgccgccgtgcccggcgcgatccgggtcgccgcgtcgctcgacctg
ccctcgccgctcagcgaggaggcggccgcgcgcgagctgcgcgcgatcgcgcacgcgaac
cggccgggggaggcgatgatcgggctcggctaccacgcgacgatcaccccgccggtcgtg
cgccgcaacgtgctcgaggaccccagctggtacaccgcctacacgccgtaccagcccgag
atctcccagggccggctggaggcgctgctcaacttccagaccatggtcggcgacctcgcc
gggctgcccaccgccaacgcgtcgctgctcgacgagggcacggccgcggccgaggcgatg
acgctggtacgtcgggccaagaagtcggccgctggcccgttcgtggtcgacgccgacgcg
ctgccgcagaccatcgacgtggtgcgcacccgcgccgaggcgatgggcatcgaggtggtc
gtggccgacctgaccggcgggctgccggagggtgagctgtgcggcgtgctggtgcagtac
ccgggctcgtccggccgggtgctcgacccgcgcccgctgatcgagcaggcccacgagcgc
aacgccctggccgtcgtcggcgccgacctgctcgcgctcaccctgctcgagtcgcccggc
gagctcggtgccgacgtcgtggtcggctccagccagcgcttcggcgtgccgctcttctac
ggcggaccgcacgcgggctacatggccgtcgccgcgggcctggagcgacacctcccgggc
cgcctcgtcggcgtctccgtcgacgcggagggccgcccggcgtaccgcctcgcgctgcag
acccgcgagcagcacatccgccgcgacaaggcgacctccaacatctgcaccgcgcaggtg
ctgctcgccgtcgtggcgtcgatgtacgccgtctaccacggccccgaggggctccgagcg
atcgcgacccgcacccaccggtacgccgcggtgctcgccgccgccctcgccgaggcgggc
ttcccggcccggcaccggcagttcttcgacaccctgaccgtggccgttcccgggcgggcg
cacgacgtcgtgaccgccgcccggggcctgggcctccagctgcgcctcgtggacgccgac
cacgtcggcatcagcacctccgagctcaccacccgatcgacgatcgccagcgtgctcaag
gcattcggggtcgcggtcaccgacctcgacgccgtcgacgcgatgacgcccgacgcgctc
ccggaacagctgcggcgcggcacgccgtacctcacccacgaggtgttctccacccaccac
agcgagaccgcgatgctgcgctacctgcgccgcctctcggcccgcgactacgcgctcgac
cgcggcatgatcccgctgggctcgtgcacgatgaagctcaacgcgaccaccgagatggag
ccgatctcgctgccgggcttcgccgacctgcacccgttcgtgccggccgaggacgccacc
ggctaccggcagctggtcgacgagctcgagggcctgctggccgaggtgaccggttacgac
cgggtctcgatccagccgaacgccggctcgcagggcgagctggccgggttgctcgcgatc
cgtggctaccaccgcgcgaacggcgaggcgcaccgcgacgtctgcctgatcccgagctcg
gcccacggcaccaacgccgcctccgcggtcatggccggcatgaaggtcgtcgtggtcaag
tccggcgacgggggagaggtcgaccttgccgacctccgggcgcagtgcgagaagcacgcc
gacgacctcgccgcgatcatggtgacctacccgtcgacgcacggcgcctacgaggacacc
atcaccgagctctgccgggtcgtccacgaccacggcggccaggtgtacgtcgacggtgcc
aacctcaacgcgctgctcggctacgccaagccgggcgagttcggcggcgacgtctcccac
ctcaacctgcacaagaccttctgcatcccgcacggcggcggtggcccgggggtcggcccg
gtcgcggtgcgcgcccatctcgcgccgtacctgccctcccacgccatgcaccccgagcag
gccaagcgcgagggtatcggcccgatcagcgccgcgccgtacggctcggcgggcatcctg
ccgatctcgtgggcctacgtccgcctgatgggtgccgccggcctgacccgggccaccgcg
gtcgcggtgctgtccgccaactacgtcgccacccgcctcggcgagcactatccggtgctc
taccgcggccacggcggcctggtggctcacgagtgcatcctcgacctgcgcggcctcacc
aaggacaccggcgtcagcgtcgacgacgtcgcgaagcggctgatcgactacggcttccac
gccccgacgatgtcgttcccggtcgcgggcaccctgatggtcgagccgaccgagtcggag
gacctcgccgagatcgaccgcttcatcgacgcgatgatcgccatccgcggcgagatcgac
cgggtggcctcgggggagtggacgccggagacctcgccgctgcgcggcgccccgcacacc
tcgcgcgcgctggtcggcgactgggaccgcgcctacacccgcgaggaggcggtcttcccg
accggcgtcaccggacccaacggagcgggcgacaagtactggcccccggtcgctcgcatc
gaccaggcctacggcgaccgcaacctggtctgcgcgtgcccgccgccggaagcgttcgcg
gagtga
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