Nocardioides sp. LMS-CY: KM427_12880
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Entry
KM427_12880 CDS
T10875
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nocl Nocardioides sp. LMS-CY
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocl03400
]
KM427_12880
DNA repair and recombination proteins [BR:
nocl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KM427_12880
Archaeal homologous recombinant proteins
KM427_12880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
AAA
Motif
Other DBs
NCBI-ProteinID:
QWF24508
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All DBs
Position
complement(2670029..2672668)
Genome browser
AA seq
879 aa
AA seq
DB search
MRMHRLRATAFGPFAGTIDVDFDQLSTAGLFLLSGPTGAGKTSVLDAVCFALYGDVPGDR
NAAKRLRSDLAAPGTRPEVELEATLSGRRFRITRSPSWERPKKRGDGMTTEQASVTIAER
VHGSWVTQSTRLDETGHLVSRLLGMNVAQFTQVAMLPQGRFQAFLRARSEERHRLLQQLF
RTGRFEDVEKWLRDRRLDLRRRTDAAGRTVDDLVSRVSETTGSEVSADVSPEAWARDLHA
DAAAAAAEATETATVATEAEAAARAALDRARDLHRRRARIDAAAADRARLEASAEEHAAA
LRRLEAARRAAGVVPLHRVAVTAGRAHSAARSSVTTDDRPELERALAAAVDGAARIRALE
PRVRRLRAVTTETARLERRATELATAGERARTEAHALVASLTARLGEAEAAHAAARQETL
DRRERAIGLREQRVNGMAAEIAAGLVVGGSCPVCGSCDHPHKAAAPHDAPDEAAEKAAQK
AADDAAATEFVRAGQVRDLQTSLAAATERVDTVPPEIATEAGAVAAALDALHAEADALRG
ELVDYDEHQLVACQQAEHDARAGLAALDRLAAAERSLAEAEQALASAVVDAGFAGSEEAL
AAALDQRAYDDLARHTADHDRRLAAVAAVLAEPGADEVAAADPPDLPALTQTHEEALRGL
RDAHARQAATHARAERLERLTADLARAVAAWRPVSEELDVLTRLSAFVEGKAADNRLQMR
LSAYVLAYRLSQVVAAANERLDRMSDRRYTLEHTGRRGAGETRGGLSLLVRDDWSGEARD
PATLSGGETFVVSLALALGLADVVTQEAGGADLDTLFVDEGFGALDADTLDDVMDTLDSL
RDGGRVVGVVSHVAEMRDRIPTQLLVSKSRGGSTVAISR
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
gtgaggatgcaccggctgcgcgcgacggcgttcggaccgttcgccggcaccatcgacgtc
gacttcgaccagctgtcgaccgccggtctcttcctgctctccggcccgaccggcgccggc
aagaccagcgtgctcgacgcggtctgcttcgcgctctacggcgacgtgcccggcgaccgc
aacgccgcgaagcggctgcgctccgacctcgcggcgcccggcacccgcccggaggtcgag
ctcgaggcgacactgtcgggccggcgcttccggatcacccggtccccgtcctgggagcgt
cccaagaagcgtggtgacggcatgaccaccgagcaggcgtcggtcacgatcgcggagcgg
gtgcacgggtcgtgggtcacccagtccacccggctcgacgagaccggccacctggtctcg
cggctgctgggcatgaacgtcgcgcagttcacccaggtcgccatgctcccccagggccgg
ttccaggcgttcctgcgcgcgaggtcggaggagcgccaccggctgctccagcagctgttc
cgcaccggccgcttcgaggacgtcgagaagtggctgcgcgaccgccgcctcgacctgcgg
cggcgcaccgacgcggcgggtcgcaccgtcgacgacctggtgagccgggtcagcgagacc
accggcagcgaggtgtccgccgacgtctcgcccgaggcctgggcccgcgacctgcacgcc
gacgcggcggcagccgcggccgaggcgaccgagaccgcgaccgtggccaccgaggccgag
gcggccgcccgcgccgctctcgaccgggcgcgcgacctgcaccggcggcgggcccgcatc
gacgcggccgccgccgaccgggcacggctcgaggcgagcgccgaggagcacgcggccgcg
ctgcgccggctggaggccgcccgccgggccgcgggcgtcgtccccctccaccgggtggcg
gtcaccgccggccgggcccacagcgccgcccgcagctccgtgaccaccgacgaccgaccc
gagctcgagcgggcgctcgccgcggcggtcgacggggccgcgcgcatccgagcgctcgag
ccccgggtccggcggctccgggcggtcaccaccgagaccgcccggctggagcgacgcgcc
accgagctggccacggccggcgagcgggcccgcaccgaggcgcacgcgttggtggcgagc
ctgaccgcgcggctcggcgaggccgaggcggcgcacgccgccgcccggcaggagaccctc
gaccgtcgggagcgggccatcgggctccgggagcagcgggtcaacggcatggccgccgag
atcgccgccggcctcgtcgtcggtggctcctgccctgtctgcggctcctgcgaccacccg
cacaaggcggccgctccccacgacgctcccgacgaggcggccgagaaggcagcccagaag
gcggccgacgacgcggcggccaccgagttcgtccgcgcgggccaggtccgcgacctgcag
acctcgctcgcggcggcgaccgaacgggtcgacaccgtcccgcccgagatcgcgaccgag
gccggcgcggtcgccgccgctctcgacgccctgcacgccgaggccgacgcgctccgtggg
gagctcgtcgactacgacgaacaccagctcgtcgcctgccagcaggccgagcacgacgcc
cgtgccggtctcgccgcgctcgaccggttggcggccgccgagaggtccctcgccgaggct
gagcaggcgctggcgtccgccgtcgtcgacgccgggttcgccgggtccgaggaggcgctg
gcggcggcactcgaccagcgggcctacgacgacctggcccggcacaccgccgaccacgac
cggcgcctggccgcggtcgcggccgtgctagccgagccgggtgccgacgaggtcgccgcg
gcggacccgcccgacctgccggcgctcacgcagacccacgaggaggcgctgcgcggactg
cgcgacgctcatgcgcggcaggccgccacgcacgctcgcgccgagcgcctggagcggctc
accgccgacctcgcccgggccgtcgcggcctggcgacccgtgagcgaggagctcgacgtg
ctcacccggctctcggccttcgtcgagggcaaggcggccgacaaccggctccagatgcgg
ctgtcggcctacgtcctcgcctaccggctctcccaggtcgtcgcggccgccaacgagcgg
ctcgaccggatgagcgaccggcgctacaccctcgagcacaccggtcgtcgcggcgccggc
gagacccggggcgggctgagcctgctggtgcgcgacgactggtccggcgaggcccgcgac
ccggcgacgctgtcgggcggcgagacgttcgtggtctccctggccctggccctcgggctc
gccgacgtcgtcacccaggaggccggcggcgccgacctcgacacgctcttcgtcgacgag
gggttcggcgcgctcgacgccgacaccctcgacgacgtgatggacaccctcgactccctg
cgcgacggcggccgggtggtcggcgtggtcagccacgtcgccgagatgcgcgaccggatc
cccacccagctgctcgtcagcaagtcgcggggcggctcgacggtggcgatcagccgctga
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