Nocardioides sp. LMS-CY: KM427_14590
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Entry
KM427_14590 CDS
T10875
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
nocl Nocardioides sp. LMS-CY
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nocl03036
]
KM427_14590 (xerD)
Chromosome and associated proteins [BR:
nocl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
KM427_14590 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Motif
Other DBs
NCBI-ProteinID:
QWF20224
LinkDB
All DBs
Position
complement(3043326..3044261)
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AA seq
311 aa
AA seq
DB search
MGDPQRAVRTYLDHLSVERGLAANTLASYRRDLRRYLGYLDQAGIDDLDRVSEATVTGFL
VRLREGDAEHPALSSTSAARTVVAVRGFHKFAVADGLATTDPASGVKPPAPAKRLPKALP
LADVEAILDAAGAPGTTLALRDRALLELLYGTGARISEAVGLDVDDLDPGASGVDGTVLL
RGKGGKERIVPVGSYAREAVDAYLVRGRPELVAAGRGTAALFLNARGGRLSRQSAWAVLV
KAADRAGVTKDVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDNLRE
VFATAHPRARD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatccacagcgggccgtccgcacctacctcgaccacctctcggtcgagcgcggg
ctggcggcgaacacgctcgcgtcgtaccgccgcgacctgcgccgctatctcggctacctg
gaccaggccggcatcgacgatctcgaccgggtgagcgaggcgacggtgaccggcttcctg
gtgcggctgcgcgagggcgacgccgagcacccggcgctgagctcgacctcggcggcccgg
accgtggtggcggtgcgtggcttccacaagttcgcggtcgccgacggcctcgcgacgacc
gacccggcgagcggggtgaagccgccggcgcccgcgaagcggctgcccaaggcgctgccg
ctcgccgacgtcgaggcgatcctcgacgccgccggcgcgccgggcacgacgctcgcgctg
cgcgaccgggccctgctcgagctgctctacggcaccggcgcccgcatctcggaggcggtc
ggcctggacgtcgacgacctcgaccccggcgcgtcgggcgtcgacgggaccgtgctgctg
cgcggcaagggcggcaaggagcggatcgtgccggtcgggtcctacgcccgcgaggcggtc
gacgcctacctggtccgcggccgacccgagctggtcgcggccgggagggggacggcggcg
ctcttcctcaacgcccgcggcggtcggctgtcccggcagtccgcgtgggcggtgctggtg
aaggccgccgaccgggccggcgtcaccaaggacgtctcaccgcacacgctgcggcactcg
ttcgccacgcacctgctcgacggcggcgccgacgtccgcgtcgtgcaggagctgctcggg
cacgcgtcggtcacgaccacccaggtgtacacactggtgaccgtggacaacctgcgcgag
gtcttcgcgaccgcacacccccgggcgcgggactga
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