Nocardioides sp. LMS-CY: KM427_15010
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Entry
KM427_15010 CDS
T10875
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl00220
Arginine biosynthesis
nocl00240
Pyrimidine metabolism
nocl00250
Alanine, aspartate and glutamate metabolism
nocl01100
Metabolic pathways
nocl01110
Biosynthesis of secondary metabolites
nocl01240
Biosynthesis of cofactors
Module
nocl_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KM427_15010 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KM427_15010 (carB)
00220 Arginine biosynthesis
KM427_15010 (carB)
Enzymes [BR:
nocl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
KM427_15010 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_3
ATP-grasp_4
ATP-grasp_2
Raf1_HTH
Motif
Other DBs
NCBI-ProteinID:
QWF20297
LinkDB
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Position
complement(3131585..3134917)
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AA seq
1110 aa
AA seq
DB search
MPKREDIKSVMVIGSGPIIIGQACEFDYSGTQACRVLKEEGIRVVLVNSNPATIMTDPEF
ADATYVEPITPEFVEKVIAQERPDALLPTLGGQTALNAAIALHERGVLEKYGVEMIGASF
EAIHRGENRELFNAIVEKVGGEVARSFVCHSLDDCEKAVAELGYPVVVRPSFTMGGTGSG
IAYDEGDLARIAGAGLAASPTTEVLIEESIIGWKEYELEVMRDQADNVVIICSIENLDPM
GVHTGDSITVAPAMTLTDREYQHLRDLAIGIIREVGVDTGGCNIQYAVNPRDGRVIVIEM
NPRVSRSSALASKATGFPIAKIAAKVAIGYTLDEIPNDITTRDDGQSTPAAFEPTLDYVV
VKVPRFAFEKFPGADPTLTTHMKSVGEAMAIGRNFTEALQKALRSLEAPSSGKGAALFDW
HQEWVELDKIALLEQIRTPHDGRLKRVMDAIRAGATPEEIFDATGIDPWFVDQLMLINEV
AAEVTAAPELTPALLRKAKRHGFSDVQIGKIRGMAADVVRGVRHALGIRPVYKTVDTCAA
EFAAATPYHYSSYDEETEVAPRERPAVIILGSGPNRIGQGIEFDYSCVHASLALSHSKGG
SGYETVMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHAEEQAGPVAGVICQLGGQTP
LGLAQALKDNGVTVVGTQPEAIHLAEERGAFGRVLADAGLPAPKHGMATSYADAQRIAAG
IGYPVLVRPSYVLGGRGMEIVYDDAALEGYIERATEIGPEHPVLVDRFIDDAVEIDVDAL
YDGEELFLGGVMEHIEEAGIHSGDSSCALPPITLGDSEIRRIREATEGIARGVGVRGLLN
IQFALGSDVLYVLEANPRASRTVPFVSKATATPLAKAAARVMMGESIASLRAAGVLPAAG
DGGTLPPDQPIAVKEAVMPFNRFRTPDGRQVDTVLGPEMKSTGEVMGFDADFGTAFAKAQ
AGAFGPLPTSGKVFVSMANRDKRHMIFPIKVLADHGFEILATQGTAEVLRRNGVQAAIVR
KHYEGEGPAGEPTTVQMILDGDIDLVINTPNGSASGSSSRADGYEIRTASVVANIPCITT
VQGLGAAVQGIEAVRRGEIGVRSLQDWARR
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgcgaggacatcaagtcggtcatggtgatcggctccgggccgatcatcatc
ggccaggcgtgcgagttcgactactcgggcacccaggcctgccgggtgctcaaggaggag
ggcatccgggtcgtcctggtgaactccaacccggccacgatcatgaccgaccccgagttc
gccgacgcgacgtacgtcgagccgatcacgccggagttcgtcgagaaggtgatcgcccag
gagcgccccgacgcgctgctgccgacgctcggcggccagaccgcgctcaacgccgcgatc
gcgctgcacgaacgcggcgtgctcgagaagtacggcgtcgagatgatcggcgcgagcttc
gaggcgatccatcgcggcgagaaccgcgagctcttcaacgcgatcgtcgagaaggtcggc
ggcgaggtcgcccgcagcttcgtgtgccactcgctcgacgactgcgagaaggccgtcgcc
gagctcggctacccggtcgtggtgcgcccgtcgttcaccatgggcggcaccggctccggc
atcgcctacgacgagggcgacctggcccgcatcgccggcgccggcctcgccgccagcccg
accaccgaggtgctgatcgaggagtcgatcatcgggtggaaggagtacgagctggaggtg
atgcgcgaccaggccgacaacgtcgtcatcatctgctcgatcgagaacctcgacccgatg
ggcgtgcacaccggcgactcgatcaccgtcgcaccggcgatgaccctcaccgaccgcgag
taccagcacctgcgcgacctggcgatcggcatcatccgcgaggtcggcgtcgacaccggc
ggctgcaacatccagtacgccgtcaacccgcgcgacggccgggtgatcgtcatcgagatg
aacccccgggtgtcacggtcctccgcgctcgcctccaaggcgaccggcttcccgatcgcc
aagatcgcggccaaggtggcgatcggctacacgctcgacgagatccccaacgacatcacg
acccgcgacgacgggcagagcacgccggcggcgttcgagcccacgctcgactacgtcgtg
gtcaaggtgccgcggttcgcgttcgagaagttcccgggcgcggacccgacgctgaccacg
cacatgaagtcggtcggcgaggcgatggcgatcggccgcaacttcaccgaggcgctgcag
aaggccctgcgctccctggaggctccttcatcggggaagggggccgcgctgttcgactgg
caccaggagtgggtcgagctcgacaagatcgcgctgctggagcagatccgcacgccccac
gacggtcggctcaagcgggtgatggacgcgatccgggccggggcgacgcccgaggagatc
ttcgatgcgaccgggatcgacccgtggttcgtcgatcagctgatgctgatcaacgaggtc
gccgccgaggtcaccgccgcgcccgagctcacgcccgcgctgctgcgcaaggccaagcgg
cacggcttctccgacgtccagatcggcaagatccgcggcatggcggccgacgtcgtgcgc
ggggttcggcacgcgctgggcatccggccggtctacaagaccgtcgacacctgcgcggcc
gagttcgccgcggccacgccgtaccactactcctcctacgacgaggagaccgaggtcgcg
ccgcgggagcggccggccgtgatcatcctcggctccgggcccaaccggatcggccagggc
atcgagttcgactactcgtgcgtgcacgcgagcctggcgctctcgcacagcaagggcggg
tcgggctacgagaccgtgatggtcaactgcaaccccgagaccgtctcgaccgactacgac
acctccgaccggctctacttcgagccgttgaccctggaggacgtgctcgagatcgtccac
gccgaggagcaggccgggccggtcgcgggcgtgatctgccagctcggcggccagaccccg
ctcgggctcgcgcaggcgctcaaggacaacggcgtcacggtcgtcggcacccagcccgag
gcgatccacctcgccgaggagcgcggcgccttcggccgcgtgctggcggacgccggcctg
ccggcgcccaagcacggcatggcgacgtcgtacgccgacgcgcagcggatcgccgccggg
atcggctacccggtgctggtgcgcccgtcgtacgtcctcggcggccgcggcatggagatc
gtgtacgacgacgccgcgctcgagggctacatcgagcgcgccaccgagatcggcccggag
cacccggtgctggtcgaccggttcatcgacgacgcggtcgagatcgacgtcgacgcgctc
tacgacggcgaggagctcttcctcggcggcgtgatggagcacatcgaggaggccggcatc
cactccggcgactcctcgtgcgcgctgccgccgatcaccctgggcgacagcgagatccgc
cggatccgtgaggcgaccgaggggatcgcgcgcggggtcggggtacgcgggctgctcaac
atccagttcgcgctcgggtcggacgtgctgtacgtcctggaggccaacccgcgtgcgtcg
cgcacagtgccgttcgtgtcgaaggcgaccgcgacgccgctggcgaaggccgcggcccgg
gtgatgatgggggagtcgatcgcgtcgctgcgcgccgccggggtgctgcctgcggccggc
gacggtggcacgctgccgcccgaccagccgatcgcggtcaaggaggccgtgatgccgttc
aaccggttccggacccccgacggcaggcaggtcgacaccgtcctcgggcccgagatgaag
tcgacgggtgaggtgatgggcttcgacgccgacttcggtacggcgttcgcgaaggcccag
gccggcgcgttcggaccgctcccgaccagcggcaaggtcttcgtgagcatggcgaaccgc
gacaagcggcacatgatcttcccgatcaaggtgctcgccgaccacggcttcgagatcctc
gcgacccagggcaccgccgaggtgctccggcgcaacggcgtccaggcagcgatcgtccgc
aagcactacgagggcgaggggccggccggcgagccgacgaccgtgcagatgatcctggac
ggcgacatcgacctggtgatcaacactcccaacggctcggccagcggctcgtcctcccgg
gccgacggctacgagatccgtacggcgtcggtcgtcgccaacatcccgtgcatcaccacg
gtccagggtctcggtgccgcggtgcagggcatcgaggcggtgcggcggggcgagatcggc
gtgcgctcgctccaggactgggcacgccgatga
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