Nocardioides sp. LMS-CY: KM427_15145
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Entry
KM427_15145 CDS
T10875
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KM427_15145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocl02000
]
KM427_15145
Transporters [BR:
nocl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
KM427_15145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QWF20324
LinkDB
All DBs
Position
complement(3161375..3163120)
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AA seq
581 aa
AA seq
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MFKYRKRVFAASAAIALAAGLAACGGDSDGGSSDNPSGDAGAAEAGGTLNYLIYAPIEHV
DPQRIYVGRDITNFSRTVYRQLVTFPISTDPEVSNTPVADLATDTGTSEDGGKVWSFTIK
DGVKWEDGQPITCEDFKYGASRVFATDVITGGPNYLLSYLDIPTDKKTGLPAYNGPYKGD
GQELFDKAITCDGNTITYNFKQPWPDFPLAVAALHMMDPYRQDKDQGDKSNFQIFSNGPY
KLEGTWSKNKGATFVKNENYDAATDDPENIRRALPDKIVFNIGQTTETIYDQLIADTGDA
QTAVTAQRVPPAYYNQIEGAVADRSVLVDSPFVDYLVPNFRKLSDPKVREALKVATNATA
WINAGGGEKAYGPAESIVNPAVVGYQDNPAFSGPQEGDPAAAKKLLEEAGVQMPYPLTFT
YPSTETADKQAAALKETWDEAGFDTTLDGLGDTYYDVIQKPNKESDVIWGGWGADWPSAI
TVTPPLFDSRINLTQNSDGQDYGAYQSDEFNGLVDEAQNAASLEDQTAALQQADIVLGQD
VAYIPLEITKFYFLYGSKVTGYTNTPASAMYPDLGAIGVSS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtatcgaaagcgggtgtttgctgcctccgctgcgatcgctctcgctgccggc
ctggcggcgtgcggtggtgacagtgatggaggaagctccgacaaccccagcggcgacgcc
ggtgccgcagaggccggtggcactctcaactacctcatctacgccccgatcgagcacgtc
gacccgcagcggatctacgtgggtcgcgacatcaccaacttcagccggacggtctaccgc
cagctggtgacgttcccgatctccaccgaccccgaggtctccaacaccccggtcgccgac
ctggcgaccgacaccggaacctccgaggacggtggcaaggtctggtccttcacgatcaag
gacggcgtgaagtgggaggacggccagccgatcacgtgtgaggacttcaagtacggcgcc
tcgcgggtcttcgcgaccgacgtgatcacgggtggtccgaactacctgctgagctacctg
gacatcccgactgacaagaagaccggtctgccggcctacaacggtccctacaagggtgac
ggccaggagctgttcgacaaggccatcacctgcgacggcaacaccatcacgtacaacttc
aagcagccgtggccggacttcccgctcgccgtggcggcgctgcacatgatggacccgtac
cgccaggacaaggaccagggcgacaagtccaacttccagatcttctccaacggcccctac
aagctcgagggcacctggagcaagaacaagggcgcgacgttcgtcaagaacgagaactac
gacgcggcgaccgacgacccggagaacatccgccgggcgctgccggacaagatcgtcttc
aacatcggccagaccaccgagacgatctacgaccagctgatcgccgacaccggtgacgcg
cagaccgccgtcaccgcgcagcgcgtcccgccggcgtactacaaccagatcgagggcgcg
gtcgccgaccgctccgtgctggtcgactcgccgttcgtcgactacctggtcccgaacttc
cgcaagctgtccgacccgaaggtccgcgaggccctcaaggtcgcgacgaacgcgacggcg
tggatcaacgccggcggtggcgagaaggcctacggtcccgccgagtccatcgtgaacccg
gctgtggtcggctaccaggacaacccggcgttctcgggcccgcaggagggcgacccggcc
gctgcgaagaagctcctcgaggaggcgggcgtccagatgccgtacccgctcaccttcacc
tacccgagcacggagaccgccgacaagcaggccgccgcgctgaaggagacctgggacgag
gccggcttcgacacgaccctcgacggcctgggtgacacctactacgacgtcatccagaag
cccaacaaggagagcgacgtgatctggggtggctggggtgccgactggccgtccgccatc
accgtgaccccgccgctgttcgacagccggatcaacctgacccagaactccgacggtcag
gactacggcgcctaccagagcgacgagttcaacggcctggtcgacgaggcgcagaacgcc
gcctcgctggaggaccagaccgctgcgctgcagcaggcggacatcgtcctcggccaggac
gtcgcctacatcccgctcgagatcacgaagttctacttcctctacggctcgaaggtgacc
gggtacaccaacaccccggccagcgcgatgtaccccgacctgggtgccatcggcgtgtcg
tcctga
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