Nocardioides sp. LMS-CY: KM427_19765
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Entry
KM427_19765 CDS
T10875
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl00020
Citrate cycle (TCA cycle)
nocl00190
Oxidative phosphorylation
nocl00650
Butanoate metabolism
nocl00720
Other carbon fixation pathways
nocl01100
Metabolic pathways
nocl01110
Biosynthesis of secondary metabolites
nocl01120
Microbial metabolism in diverse environments
nocl01200
Carbon metabolism
Module
nocl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nocl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KM427_19765
00650 Butanoate metabolism
KM427_19765
09102 Energy metabolism
00190 Oxidative phosphorylation
KM427_19765
00720 Other carbon fixation pathways
KM427_19765
Enzymes [BR:
nocl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
KM427_19765
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
DAO
FAD_oxidored
AlaDh_PNT_C
Pyr_redox
FAD_binding_3
GIDA
Thi4
NAD_binding_7
Lycopene_cycl
Imm53
ResB
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
QWF21161
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Position
complement(4166980..4168824)
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AA seq
614 aa
AA seq
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MSERHPMTGNEMSGSAAGGLERHEYDVVVIGAGGAGLRAAIAAHEAGARTAVVCKSLLGK
AHTVMAEGGIAAAMGNRWPEDNWEVHFRDTMRGGKMLNNWRMAQLHAQEAPERVQELEDW
GALFDRTDDGLISQRDFGGHKYARLAHVGDRTGLEMIRTLQQRTVQLGIDVFMECTITEL
LKDGSRVSGAFGYWRETGRFVAFAAPTVILATGGIGKSFKVTSNSWEYTGDGHALALRAG
AALINMEFVQFHPTGMVWPPSVKGLLVTESVRGDGGVLKNSEGKRFMFDYIPEFFKAETA
DTIEEADRWYEDKKNNRRPPELLPRDEVARAINSEIKAGRGSPHGGIYLDIASRRTPEFI
RKRLPSMYHQFKELADVDITQEPMEIGPTCHYVMGGVEVDADSQESAVTGLYAVGECSGG
MHGSNRLGGNSLGDLLVFGKRAGEHAAAYAAGLSTRPAVDEADIKAASTSALAPFEVEGG
ENPYTIQHDLQQSMNDLVGIIRTARELEQSLVEIEGLKERARHMVVEGHRQYNPGWHLSI
DLRNMLLVSEAIAKAALAREESRGGHTRDDFPQTDNEVWGTKNLVVTLDAGGTGVDLSEK
PLPVLPDELKKYFD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcggcaccccatgaccggcaacgagatgtccgggtcagcggccggcggactg
gagcggcacgagtacgacgtggtcgtgatcggtgccgggggcgccggcctgcgcgcggcg
atcgcggcgcacgaggcgggtgcacgcaccgcggtggtgtgcaagtccctgctcggcaag
gcgcacacggtgatggccgagggcggcatcgccgccgcgatgggcaaccgctggcccgag
gacaactgggaggtgcacttccgcgacaccatgcgtggcgggaagatgctcaacaactgg
cggatggcccagctgcacgcccaggaggcgcccgagcgtgtgcaggagctcgaggactgg
ggcgccctcttcgaccgcaccgacgacgggctgatctcgcagcgcgacttcggcggtcac
aagtacgcccggctcgcccacgtcggcgaccgcaccgggctggagatgatccgcaccctc
cagcagcgcaccgtgcagctcggcatcgacgtgttcatggagtgcacgatcaccgagctg
ctcaaggacggatcgcgcgtgtcgggtgccttcgggtactggcgcgagaccggccgcttc
gtcgcgttcgcggcaccgacggtgatcctcgcgaccggcggcatcggcaagtccttcaag
gtcacctcgaactcctgggagtacaccggcgacggccacgcgctcgcgctccgggcgggc
gccgcgctgatcaacatggagttcgtgcagttccacccgaccggcatggtgtggccgccc
tcggtgaaggggctgctggtcacggagtcggtgcgcggcgacgggggtgtgctcaagaac
tccgagggcaaacgcttcatgttcgactacatcccggagttcttcaaggcggagacggcc
gacaccatcgaggaggccgaccggtggtacgaggacaagaagaacaaccggcggccaccc
gagctgctgccccgtgacgaggtggcgcgggcgatcaactccgagatcaaggccggccgc
ggatcaccgcacggcggcatctatctcgacatcgcgtcccggcgtacgcccgagttcatc
cgcaagcggctgccgtcgatgtaccaccagttcaaggagctggccgacgtcgacatcacc
caggagccgatggagatcgggcccacctgccactacgtgatgggcggggtcgaggtcgac
gccgacagccaggagagcgcggtcaccggcctgtacgccgtgggggagtgctcgggcggc
atgcacggctccaaccggctgggcggcaactcgctcggcgacctgctggtgttcggcaag
cgggcgggtgagcacgctgcggcgtacgccgcggggctctcgacccgtccggcggtcgac
gaggccgacatcaaggcggcgtcgacgagcgccctcgcgccatttgaggtagagggaggc
gagaacccgtacacgatccagcacgacctccagcagtcgatgaacgacctggtcggcatc
atccgcaccgcccgcgagctcgagcagtcactggtcgagatcgaggggttgaaggagcgc
gcgcggcacatggtcgtggaggggcatcggcagtacaaccccggctggcacctgtcgatc
gacctgcgcaacatgctgctggtctcggaggccatcgcgaaggcggcgctggcccgcgag
gagtcacgcggcggccacacccgcgacgacttcccccagaccgacaacgaggtgtggggc
acgaagaacctcgtcgtcaccctcgacgccggcggcaccggcgtggacctgtccgagaag
ccgttgccggtgctgccggacgagctcaagaagtacttcgactag
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