Nocardioides sp. LMS-CY: KM427_20955
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Entry
KM427_20955 CDS
T10875
Symbol
cydD
Name
(GenBank) thiol reductant ABC exporter subunit CydD
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KM427_20955 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocl02000
]
KM427_20955 (cydD)
Transporters [BR:
nocl02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
KM427_20955 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
Rad17
nSTAND1
AAA_23
AAA_25
AAA_28
T2SSE
NACHT
RsgA_GTPase
nSTAND3
AAA_30
DUF87
ATPase_2
PRK
Motif
Other DBs
NCBI-ProteinID:
QWF21382
LinkDB
All DBs
Position
complement(4421123..4424317)
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AA seq
1064 aa
AA seq
DB search
MRPTDPRVRRQLAPARRQLVVVLVAGVVASGLLVGQAWAVTELILAALDGVGVTTWAIVV
AAVFAARAAVGWTTDTMAARAAAVVGADVRRRVVRAILGRGGDDGGAGRSTGELAGLATR
GVTAAEPYLTRYVPALVLAGVLPVVTLVAIATQDPMSALIVLATLPLIPVFGILVGLATQ
DRARSQWRALASLSGHFLDVMRGLPTLVAFRRAEAQSATIRAITDRYRRRTVETLQIAFA
SSAVLELVATLSVALVAVTVGIRLANGSLDLETALVVLLLAPEAYWPLRRVGAEFHAAAE
GVATFEAASDLVDADDPTPHRRPGALRLEQVSVLRPGRAVPALDDVSLAVPDRGVLAVTG
PSGCGKSTLLAVLAGLLEPTSGVVHGPTRDRIAWLPQRPVFVAGTIADNLRLAVPSASRE
QLLAALETVALPMDPDTRLGEDGTTLSAGERARLALARVVLAERPYVLLDEPTAHLDAET
ERVIAEVVQGLGRRSAVVVVAHRPALVALADRVVTLPAPQPVLPVRGASVAARSAAPEPP
AEQPRRGLLLPTVLGGLASASGVALTATAGWLIVQASYQPAILTLMVAIVGVRAFGIARP
VLRYAERLRSHDVVLRLLADRRVAVYDAVVPLTPGALGRRRGDVLAAVVDDVDAVLDREL
RVRMPVRGFALTAAIAVVFVAFLAPVVLPVLLGVCAAGAAGYVLARTGAGRAERDAVAIR
ARLSDAVVEATQTASELAMWQAEERAVGAVSALGADLGRRTVAAATWLAGGRALVLVCSG
LGVAVSAPLLTGTVSGPMLALLVLLPLALGEVAASLADAGALAARTRAAEERLGALAARA
PAVASPAAPVPPAGATVALEAVSAGWDDRPVLRDLDLVLRPGDRLGVVGPTGCGKSTLAA
LLMRFVDPIDGTVRLGGQPLPDVSLDDVRRTVGLVDDDPHIFATTLAENVRLARPAATDG
DVEAALRQARLGDWLDSLPDGLDSWLGDGHAQVSGGERARIAIARSLLADQPVLVLDEPA
AHLDGATAEDLAAEVLSRGDGRTVVWITHAEAGLDRVDRVLSLG
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccaccgacccccgggtacgacgacagctggcgcccgcccggcgccagctcgtc
gtcgtgctggtcgcgggcgtggtcgccagcggtctgctggtcggccaggcctgggcggtg
accgagctgatcctggccgccctcgacggggtcggcgtgacgacctgggcgatcgtggtg
gcggcggtgttcgcggcccgggcggcggtgggctggacgaccgacaccatggcggcccgg
gcggccgcggtcgtcggcgccgacgtacgccgccgggtcgtgcgcgcgatcctggggcgt
ggcggggacgacggaggagcgggccggtcgacgggcgagctcgcgggcctcgccacccgc
ggcgtgaccgcggccgagccgtacctgacccgctacgtgcccgcgctggtgctggccggc
gtgctgccggtggtcaccctggtcgcgatcgcgacccaggacccgatgagcgcgctgatc
gtgctggcgacgctgccgctgatccccgtgttcggcatcctggtcggcctcgccacccag
gaccgcgcacgctcgcagtggcgggccctcgcgtcgctgtcgggacacttcctcgacgtg
atgcgcggactgcccacgctggtcgccttccgccgggccgaggcgcagtcggcgacgatc
cgggcgatcaccgaccgctaccggcgccggaccgtggagacgctgcagatcgcgttcgcc
tcctcggcggtgctcgagctggtcgccacgctgtcggtcgcgctggtcgcggtgaccgtc
ggcatccggctcgccaacggctcgctggacctggagaccgcgctggtcgtgctgctgctg
gcgccggaggcctactggccgctgcgccgcgtcggcgcggagttccacgccgcggccgag
ggcgtggcgacgttcgaggcggccagcgacctggtcgacgccgacgacccgaccccgcac
cgccgccccggcgcgctgcggctcgagcaggtctccgtgctgcggcccggccgcgccgta
cccgccctcgacgacgtcagcctcgccgtccccgaccggggcgtgctggccgtgaccggc
ccgtcgggctgcgggaagtccacgctgctcgccgtgctggccgggctcctcgagccgacc
tcgggtgtcgtgcacgggccgacccgcgaccggatcgcgtggctgccgcagcgcccggtg
ttcgtcgccgggacgatcgccgacaacctccgcctcgcggtgccgtcggcgagccgcgag
cagctgctcgcggcgctcgagacggtcgcgctgccgatggatcccgacacccggctcggt
gaggacggcacgacgctgtcggccggcgagcgggcccgcctggcgctcgcccgggtggtg
ctcgccgagcggccctacgtgctgctcgacgagccgaccgcccacctcgacgccgagacc
gagcgggtgatcgccgaggtggtccaggggctgggccggcggtccgcggtcgtggtcgtc
gcgcaccgacccgcgctcgtcgccctcgccgaccgggtcgtgaccctgccggcgccgcag
cccgtgctgccggtgcggggtgcgtcggtggccgcccgctcggcggcaccggagccaccg
gccgagcagccccgtcgtggcctgctgctgccgaccgtgctcggcggcctggcctcggcg
tcgggggtggccctgaccgccaccgccggctggctgatcgtccaggcgtcgtaccagccc
gccatcctgaccctgatggtcgcgatcgtcggcgtgcgggccttcggcatcgcgcggccg
gtgctgcgctacgccgagcgcctgcgctcccacgacgtcgtgctgcggctgctcgccgac
cggcgggtcgcggtgtacgacgcggtcgtgccgttgacgccgggcgcgctcggccggcgg
cgcggcgacgtgctggcggccgtggtcgacgacgtcgacgccgtgctcgaccgggagctg
cgggtgcggatgccggtgcgcggcttcgcgctcacggcggcgatcgcggtggtgttcgtg
gccttcctggctccggtcgtgctgccggtgctgctgggcgtctgcgcggccggtgccgcg
ggctacgtgctggcgcgcaccggggccgggcgggccgagcgcgacgcggtcgcgatccgc
gcccggctctccgacgcggtcgtcgaggcgacccagaccgcgagcgagctcgcgatgtgg
caggccgaggagcgcgcggtcggtgccgtctccgcgctgggcgccgacctcggtcggcgt
accgtcgcggccgcgacctggctcgctggcggtcgggcactggtgctggtctgctcggga
ctcggcgtcgccgtctcggccccgctgctgaccggcaccgtgtcgggcccgatgctcgcc
ctgctggtgctgctgccgctcgcgctcggcgaggtcgcggcgtcgctggccgacgccggt
gccctggccgcacgcacccgggccgccgaggagcggctcggggcgctggccgctcgcgcc
cccgcggtcgcgtcgccggccgcgccggtcccgcccgccggtgccaccgtggcgctcgag
gcggtctcggccggctgggacgatcgcccggtgctccgcgatctcgatctggtgctgcgg
cccggtgaccggctcggggtggtcggaccgaccgggtgcggcaagagcacgctcgcggcg
ctgctgatgaggttcgtggatccgatcgacggcacggtccgcctcggcggacagcccctg
ccggacgtgtcgctcgacgacgtacgccgcaccgtcgggctggtcgacgacgacccgcac
atcttcgccaccacgctcgcagagaacgtccggctggcccgccccgccgccaccgacggc
gacgtcgaggccgccctgcggcaggcgcggctcggcgactggctcgactcgctgcccgac
ggcctcgacagctggctcggcgacggtcatgcgcaggtctccggcggcgagcgggcccgg
atcgccatcgcgcggtcgctgctcgccgaccagccggtgctggtgctcgacgagccggcc
gcccacctcgacggggcgaccgcggaggacctggccgccgaggtgctgtcgcgcggcgac
gggcgcacggtcgtctggatcacccacgccgaggccggcctggaccgggtcgaccgggtg
ctcagcctggggtga
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