Nocardioides sp. LMS-CY: KM427_23425
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Entry
KM427_23425 CDS
T10875
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nocl Nocardioides sp. LMS-CY
Pathway
nocl00061
Fatty acid biosynthesis
nocl00071
Fatty acid degradation
nocl01100
Metabolic pathways
nocl01212
Fatty acid metabolism
nocl02024
Quorum sensing
nocl04146
Peroxisome
Module
nocl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nocl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KM427_23425
00071 Fatty acid degradation
KM427_23425
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KM427_23425
09145 Cellular community - prokaryotes
02024 Quorum sensing
KM427_23425
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nocl01004
]
KM427_23425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nocl04147
]
KM427_23425
Enzymes [BR:
nocl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KM427_23425
Lipid biosynthesis proteins [BR:
nocl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KM427_23425
Exosome [BR:
nocl04147
]
Exosomal proteins
Exosomal proteins of breast milk
KM427_23425
Exosomal proteins of breast cancer cells
KM427_23425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QWF21835
LinkDB
All DBs
Position
complement(4961700..4963298)
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AA seq
532 aa
AA seq
DB search
MTTYNLASLLEDSAASYPDRAAIVFAPPGGPSRRLSYAEVDAFANMVANLLVSRGIGPGD
KVALTCPNLPYFTVVYYGILKAGAAVVPLNVLLKAREVAYHLGDSDARAYFCFEGTPELP
MGEEGYAGFQQADGCEHFFVITADLAAPSPIEGVETMAQAMGGQPATFEAVATDEDDTAV
ILYTSGTTGQPKGAELRHRNMRDNALSGEALFGASADRPDTYLCVLPLFHSFGQTVCQNG
PFGYGGTIVMLPRFDARGALDLMKQERITFFAGVPTMYWGLLGALESAQADGLDVTQLAD
NLRIAVAGGSALPVEVHKEFQKRFGVTILEGYGLSETSPVASFSKHGEPVRVGSIGVPIP
GVEMKLIDPASTRGAWRDVEGADEIGEIAIKGHNIMKGYHDRPEETAEAIDDGWFRSGDL
ARRDEDGWYYIVDRSKDMIIRGGYNVYPREIEEVLMSHPSVSLAAVIGVPDESHGEEIKA
VVIKAPGAEITEDELVAWSKEQMAAYKYPRVVAFVDALPMTSTGKILKRELS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtacaacctggcgagcctcctcgaggacagtgcggcgagctacccggaccgg
gcggcgatcgtgttcgcccctcccggtgggccgagtcggaggctgtcctacgccgaggtc
gacgcgttcgccaacatggtcgccaacctgttggtctcgcgcgggatcggtccgggcgac
aaggtcgcgctgacctgtccgaacctgccctacttcaccgtcgtctactacggcatcctc
aaggccggcgcggccgtggtgccgctcaacgtgctgctcaaggcgcgcgaggtcgcctac
cacctgggcgactccgacgcccgggcgtacttctgcttcgagggcacgccggagctcccg
atgggcgaggaggggtacgccgggttccagcaggccgacggctgcgagcacttcttcgtg
atcaccgcagacctggcggctccgtcgccgatcgagggcgtcgagacgatggcccaggcg
atgggcggccagccggccacgttcgaggcggtcgccaccgacgaggacgacaccgcggtg
atcctctacacctccggcacgaccggccagcccaagggcgccgagctgcgacaccgcaac
atgcgcgacaacgcgctctcgggcgaggcgctcttcggcgccagcgccgaccgcccggac
acctacctgtgcgtgctgccgctcttccactccttcggccagacggtctgccagaacggt
ccgttcgggtacggcggcacgatcgtgatgctgccgcgcttcgacgcgcgcggtgcgctg
gacctgatgaagcaggagcggatcaccttcttcgccggggtgccgacgatgtactggggc
ctgctcggcgcgctcgagagcgcccaggccgacggcctcgacgtgacccagctcgccgac
aacctgcggatcgccgtcgcgggcgggtcggcgctgccggtcgaggtgcacaaggagttc
cagaagcgtttcggcgtcacgatcctcgagggctacgggctctcggagacctcgccggtg
gcgtcgttctccaagcacggcgagccggtgcgggtcggctcgatcggcgtgccgatcccc
ggtgtcgagatgaagctgatcgaccccgcgtcgacgcgcggggcctggcgcgacgtcgag
ggcgccgacgagatcggcgagatcgcgatcaagggccacaacatcatgaagggctaccac
gaccgccccgaggagaccgccgaggcgatcgacgacgggtggttccgctcgggcgacctg
gcccggcgcgacgaggacggctggtactacatcgtcgaccgctcgaaggacatgatcatc
cgcggcggctacaacgtgtacccgcgcgagatcgaggaggtcctgatgagccacccctcg
gtctcgctcgccgcggtgatcggcgtgcccgacgagagccacggcgaggagatcaaggcc
gtcgtgatcaaggcgcccggcgccgagatcaccgaggacgagctggtcgcctggagcaag
gagcagatggcggcctacaagtacccgcgggtcgtggccttcgtcgacgcgctcccgatg
acctcgaccggcaagatcctcaagcgcgagctgtcgtag
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