Nocardioides sp. LMS-CY: KM427_23435
Help
Entry
KM427_23435 CDS
T10875
Name
(GenBank) fibronectin type III domain-containing protein
Organism
nocl Nocardioides sp. LMS-CY
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
SdrD_B
CarboxypepD_reg
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn3_2
RGI_lyase
Trypan_PARP
NDNF
Motif
Other DBs
NCBI-ProteinID:
QWF21837
LinkDB
All DBs
Position
4964348..4967896
Genome browser
AA seq
1182 aa
AA seq
DB search
MTSRSRHTSSTTPTHAWRRLLSGGTLGLVVALLLATLTTGTGAYAASPTTASVPVSTTAA
GDCGCTEKGDYETPAGLVAPNVELDGSSSAPGEDHQPRYRVTATGAPPTTTLTVRRVDDS
STVLTLTTAATKWGFSPDEQRFVTHRVVGGLLEVQVYDLTATKPATAVIQQTVQVGDAEL
GFSPDGAYFGIIHLWSTSGTTTSVLVFDATGRTAYSTTYSFSVPGSAGKRFGAAGWGFSP
TGHGFLLAYVSGQSSVEATLVDLRGGRAVLSETLTGTAHWHFSPCGSMFALVTQNDASFM
TSRLVRVADGEVLATRTDPVGAISFEATETSHVAQVGGTTRVLAPNPGCSAEQPPTWPSG
SELAASDVGARSLTLSWTAATDDVAVTGYRVRRGSTTVATVPGSQRTLQVTGLQPGTTYT
FSVEAGDAAGGWSTDGPTLRVTTAATVPTWPDTTRLVARDVTNTSLTLRWTEAATDEQGV
TGHRVYRDGTQIATLGATARTHVVDGLAPGTTYTFTVQAVDGDDNLSTDGPQTTVTTDDF
EQLDVPEIRGTIYDDANLNGRRDDGERGIDAHTYPYVGFSAYRLDGTRRLERTWTGTDGV
GRFTFDGLTDGTWLIALGVGPRIQTTPADLQPQVVQIRNGAGWGKVDFGLTDRRPFPEDG
DAKVRGVVYEDADRDGVRDAGEAPLSGMEIACGNIPMGGACHPDSVTSGSGGAYEIGALI
AGTIDLSPSLPEGSYSTGHRVAAVSSDETVEELDLGVVTGTATVTGHVFHDRDRDGARDA
GEPSLADTRVCAVDRHFKADHCIFTDDDGTYRLPALPHGTIELSVSPWHGWDQTTPASAA
VVDVGRNGTGTVHLGVDGPDGVVRGVVFHDRDRDGVRDAGEPALPGAEVCVRSPALEWYP
CSDTDDQGHYRIARLVSESYSFRHYAPAGYVSTLDEESLAFELGEDEELVVDLGYATEQE
AAPPGAPRDLRAEPGDGTVTLTWTAPEDDGGTPVLGYHVSRSTDGEQWDRVARVTAAELA
WTSTGLANGTEVRFRVTAYNAEGPGWSSDPVSAVPTAPETSPGPDPQPDPQPEPQPTPGP
QPQPEPTAVAPSAPRSLKATVRGRSVQLRWAAPATTGGAPVTDYVVQRRSGKRWVTVRDG
RSARLAATVRTPKRGAHHFRVAAVNTAGQGSWTAAVRVRVRR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcagatcccgacacacgagttccacgacgcccacccacgcctggcgacgactg
ctgtccggcggcacgctcggcctggtcgtggcgctcctgctggccaccctgaccaccggg
acgggcgcgtacgccgcctcccccacgacggcgtccgtcccggtgtccaccaccgccgcc
ggcgactgcggctgcacggagaagggcgactacgagaccccggccggcctcgtcgccccg
aacgtcgagctcgacggcagctcgtcggcccccggtgaggaccaccagccgcgctaccgg
gtcaccgccacgggcgcaccgcccacgaccaccctcaccgtgcgccgggtcgacgactcg
tccaccgtgctcaccctcaccacggcggccacgaagtgggggttcagccccgacgagcag
cggttcgtcacccatcgcgtcgtcggcggcctgctcgaggtccaggtctacgacctgacc
gcgaccaagcccgccaccgcggtgatccagcagacggtgcaggtcggcgacgccgagctg
ggcttcagccccgacggggcctacttcgggatcatccacctgtggagcaccagcggcacc
accaccagcgtcctggtgttcgacgcgaccgggcgcacggcgtacagcaccacctactcg
ttctcggtgcccggcagcgccggcaagcgcttcggcgccgccggctggggtttcagcccc
accgggcacggcttcctgctcgcctacgtcagcgggcagagctccgtcgaggccaccctg
gtcgacctgcgcgggggccgcgcggtcctctccgagacgctcaccggcaccgcgcactgg
cacttcagcccctgcgggtcgatgttcgcgctggtgacccagaacgacgccagcttcatg
accagccgcctcgtccgcgtcgccgacggcgaggtgctcgccacccgcaccgacccggtc
ggcgcgatctcgttcgaggccaccgagacctcccacgtcgcccaggtcggcggcacgacc
cgcgtgctggcgccgaacccgggctgctccgcggagcagccgccgacctggccgtccggc
tccgagctggccgcctccgacgtgggggcgcggtcgttgaccctctcctggaccgccgcc
accgacgacgtggcggtcaccggctaccgggtacgccgcggctcgacgacggtcgcgacg
gtccccggctcgcagcgcaccctccaggtcaccggcctgcagccgggcacgacgtacacc
ttctccgtggaggccggcgacgcagccgggggctggagcaccgacggacccaccctgcgg
gtcacgacggccgcgaccgtcccgacctggccggacaccacgcgactggtcgcccgtgac
gtgaccaacacctcgctgacgctgcggtggacggaggcggcgaccgacgagcagggcgtc
accggccaccgggtctaccgggacggcacccagatcgcgacgctcggcgccacggcgcgc
acgcacgtcgtcgacggcctggcccccggcacgacgtacaccttcaccgtgcaggcggtc
gacggggacgacaacctctccaccgacggcccgcagaccacggtgaccaccgacgacttc
gagcagctcgacgtccccgagatccggggcaccatctacgacgacgcgaacctcaacggc
aggcgggacgacggtgagcggggcatcgatgcccacacgtacccctacgtcgggttctcc
gcgtaccgcctcgacggcacccgacgcctcgagcgcacctggaccgggaccgacggggtc
ggccgcttcaccttcgacggcctcaccgacggcacctggctgatcgccctcggcgtcgga
ccgcgcatccagacgacgccggccgacctgcagccgcaggtggtccagatccgcaacggc
gccggctgggggaaggtcgacttcggcctgaccgaccgtcgccccttccccgaggacggc
gacgccaaggtgcggggcgtcgtgtacgaggacgccgaccgcgatggcgttcgcgacgcc
ggcgaggctcccctctccggcatggagatcgcctgcggcaacatcccgatgggcggcgcg
tgccaccccgactccgtgaccagcgggagcggcggggcctacgagatcggggcgctgatc
gccggcacgatcgatctctccccgtcgctgccggagggctcctactcgaccggtcatcgc
gttgccgcggtctcgtccgacgagaccgtcgaggagctggacctcggcgtggtcaccggc
accgcgaccgtgaccgggcacgtcttccacgaccgcgaccgcgacggcgcgcgcgacgcc
ggtgagccgagtctcgccgacacccgggtgtgtgcggtggaccgccacttcaaggccgac
cactgcatcttcaccgacgacgacgggacctaccggctccccgcgctcccccacggcacc
atcgagctctccgtgtcgccctggcacggctgggaccagaccaccccggcatccgcagcc
gtggtcgacgtcggccgcaacggcaccggcaccgtccacctcggggtcgacggccccgac
ggcgtggtgcgcggcgtggtcttccacgaccgtgaccgcgacggcgtgcgcgacgccggc
gagccggcgctcccgggcgccgaggtgtgcgtgcgctcccctgcgctcgagtggtacccg
tgctccgacaccgacgaccagggccactaccggatcgcgcggctggtcagcgagtcctac
agcttccgccactacgcgcccgccggctacgtgtcgacgctcgacgaggagtccctcgcc
ttcgagctgggcgaggacgaggagctggtcgtcgacctcggctacgcgaccgagcaggag
gccgccccgcccggcgccccccgcgacctgcgcgccgagcccggcgacggcacggtgacg
ctcacctggacggcgccggaggacgacggcggcaccccggtcctcggctaccacgtctcc
cggtccaccgacggcgagcagtgggaccgggtcgcccgggtcaccgcggcggagctcgcc
tggacctccaccggactggcgaacggcaccgaggtgcggttccgggtcacggcgtacaac
gccgagggtcccggctggtcctccgacccggtgtcggcggtcccgaccgcgccggagacc
tcgccgggccccgacccacagcccgacccgcagcccgagccgcagcccacccccgggccc
cagccgcagccggagccgacggcggtcgcgccgtccgcaccgcggtcgctgaaggccacg
gtgcgcggccgcagcgtgcagctgcgctgggcggcaccggccaccacgggtggtgccccg
gtcaccgactacgtggtgcagcgccggtcgggcaagcgctgggtgaccgtgcgcgacggc
cgctccgcgcgactcgccgccacggtgcggacgccgaagcgcggcgcgcaccacttccgg
gtcgccgccgtcaacaccgccgggcagggctcctggacggcggcggtgcgggttcgcgtc
cggcgctga
DBGET
integrated database retrieval system
