Nocardioides sp. QY071: QI633_00030
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Entry
QI633_00030 CDS
T10893
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
nocq Nocardioides sp. QY071
Pathway
nocq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QI633_00030 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocq03400
]
QI633_00030 (recF)
DNA repair and recombination proteins [BR:
nocq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QI633_00030 (recF)
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Ortholog
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
ABC_tran
AAA_27
Motif
Other DBs
NCBI-ProteinID:
WGY02165
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Position
5334..6455
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AA seq
373 aa
AA seq
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MHVARLSLHDFRSYADVDVELEPGVTAFVGRNGQGKTNLVEAVDYLSRLSSHRVATDAPL
IRAGAGQAIIRAAVVREGRTAVLEVELNPGKANRARINRSPLPRVRELAGIVRTVVFSPE
DLALVKGDPGGRRRFLDDLLVLRTPRYAGLIADHERVLKQRNTLLKTLYAARGSARDAAL
ATLAVWDDHLVATGTELLAARLALSADLAPYVGKAYEAVARGASRDDARIAYEPTVPEPT
QDAFRAELARRQADEIGRGVTLVGPHRDDLLLTLGPGDEQRLPVRGYASHGESWSFALAL
RLASYDLLRADGDDPILILDDVFAELDAERRVQLAGLVAGAEQVLVTAAVPADVPEELAG
ASFHVAAGEVTRG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcgcacggctgagcctgcacgacttccggtcctacgccgacgtcgacgtcgag
ctcgaaccgggtgtcacggcgttcgtcgggcgcaacggccagggcaagaccaacctggtc
gaggcggtcgactacctctctcgcctgtcctcgcaccgggtcgccaccgacgccccgctg
atccgcgccggcgccgggcaggcgatcatccgcgcggccgtggtccgcgaaggacgcacc
gcggtgctcgaggtcgagctcaaccccggcaaggccaaccgggcgcggatcaaccgctcg
ccgctgccgcgggtgcgcgagctggccggcatcgtgcgcaccgtcgtgttcagccccgag
gacctcgcgctggtcaagggcgacccgggcggccggcgccgcttcctcgacgacctgctc
gtgctccgcacgccgcgctacgccggcctgatcgccgaccacgagcgcgtcctcaagcag
cgcaacaccctgctcaagaccctgtacgccgcccgcggctcggctcgcgacgccgcgctg
gcgacgctggcggtctgggacgaccacctggtcgcgaccggcaccgagctgctcgcggcg
cggctcgcgctgagcgccgacctggcgccgtacgtcgggaaggcctacgaggccgtcgcc
cgcggcgcgtcgcgcgacgacgcccggatcgcctacgagccgaccgtgcccgagccgacc
caggacgcgttccgcgccgagctcgcccggcgtcaggccgacgagatcggccgcggcgtg
accctggtcgggccgcaccgcgacgacctgctgctcaccctcggcccgggcgacgagcag
cggctgcccgtgcgcggctacgccagtcacggggagtcgtggtcgttcgcgctggcgctg
cggctggcgtcgtacgacctgctgcgggccgacggcgacgacccgatcctcatcctcgac
gacgtcttcgccgagctcgacgccgagcgccgggtgcagctggccgggctggtggcgggc
gccgagcaggtcctggtcaccgcggcggtgccggccgacgtaccggaggagctggcgggg
gcgtccttccacgtcgcggcgggggaggtgacccgtggctga
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