Nocardioides sp. QY071: QI633_00040
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Entry
QI633_00040 CDS
T10893
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nocq Nocardioides sp. QY071
Brite
Enzymes [BR:
nocq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QI633_00040 (gyrB)
DNA replication proteins [BR:
nocq03032
]
Prokaryotic type
DNA Topoisomerases
QI633_00040 (gyrB)
DNA repair and recombination proteins [BR:
nocq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QI633_00040 (gyrB)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WGY02167
LinkDB
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Position
7268..9379
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AA seq
703 aa
AA seq
DB search
MSTDDQSPEVEPQVPATSGDYDASAIQVLEGLEAVRKRPGMYIGSTGERGLHHLIWEIVD
NAVDEALAGYCDTIKVTLNPDGSVSVSDNGRGIPTDTAPGQEVPAATLALTVLHAGGKFG
GGGYKVSGGLHGVGSSVVNALSTSLRLEIKNRGYLWEQDFSLGVPDFDLRQVRPLEDGER
TGTTVTWSASSEIFETTDYNLETISTRFREMAFLNKGLRIELRDARPKAEELADAVEDGA
VSDGDAAATATATSGAVHAVDVDGHKALEQVFQYERGLADYVDFLNRNKTTVSSIIAAEA
DTGDDVPNPMSLELAMQWQVSSYNESVHTFANTINTPEGGTHEEGFRAALTSLINRWGEE
WGLIKKKEDRLTGDDIREGLTAIISLKISNPQFEGQTKAKLGNTEAKGFVQSVVNDQLGA
WLEQNPNEGKEVIRKAQAAATARIAARKARDLARNRKGLLGGGGLPGKLRDCSSRNPEEC
EVFIVEGDSAGGSAVMGRENRIQAILPIRGKILNVEKARIDKVLANQEVQAIISALGTGV
HEEFDLDKLRYHKIVLMADADVDGHHINTLLLTLLFRFMRPLIDAGHVYLAQPPLYRIKW
NKPHEHEFVYSDAERDAVMRDGLEQGKKLPKDAPIQRYKGLGEMNADELWETTLDPDQRV
LLQVTLEDAAQADEIFSILMGEDVEQRRSFIQRNAKDVRFLDI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactgacgaccagtcccccgaggtcgagccccaggtccccgcgacgtcgggcgac
tacgacgcctcggcgatccaggtcctcgagggcctcgaggcggtccgcaagcgtcccggc
atgtacatcggctccaccggtgagcgcggtctgcaccacctgatctgggagatcgtcgac
aacgcggtggacgaggcgctcgccggctactgcgacacgatcaaggtcacgctcaacccc
gacggctcggtcagcgtctccgacaacggtcgcggcatcccgaccgacaccgcgccgggc
caggaggtgccggccgcgaccctggccctcaccgtcctgcacgccggcggaaagttcggc
ggcggtggctacaaggtctccggtggcctccacggtgtcggctcctcggtcgtcaacgcg
ctctccacgagcctgcgcctggagatcaagaaccgcggctacctgtgggagcaggacttc
tcgctcggcgtccccgacttcgacctgcgccaggtccgaccgctcgaggacggcgagcgc
accggtacgacggtgacctggtccgcctcgtcggagatcttcgagaccaccgactacaac
ctcgagacgatctcgacccggttccgcgagatggccttcctcaacaagggcctgcggatc
gagctgcgcgacgcccgccccaaggccgaggagctcgccgacgcggtcgaggacggcgct
gtgtccgatggcgacgccgccgcgaccgccactgcaacatctggcgcggtgcacgcggtc
gacgtcgacgggcacaaggcgctcgagcaggtcttccagtacgagcgcggcctggccgac
tacgtcgacttcctcaaccgcaacaagaccaccgtcagctcgatcatcgcggccgaggcc
gacacgggcgacgacgtccccaacccgatgagcctcgagctcgccatgcagtggcaggtg
tcgtcctacaacgagtcggtccacaccttcgccaacacgatcaacacccccgagggcggc
acccacgaggagggcttccgcgccgcgctcacctcactgatcaaccggtggggcgaggag
tggggcctgatcaagaagaaggaggaccggctcaccggcgacgacatccgcgagggtctc
accgcgatcatcagcctgaagatctccaacccgcagttcgagggccagaccaaggccaag
ctcggcaacaccgaggccaagggcttcgtccagtcggtcgtcaacgaccagctcggcgcg
tggctggagcagaaccccaacgagggcaaggaagtcatccgcaaggcgcaggcggccgcg
accgcccggatcgcggcccgcaaggcccgcgacctggcccgcaaccgcaagggcctcctc
ggcggcggcggtctgcccggcaagctgcgcgactgcagctcgcgcaacccggaggagtgc
gaggtcttcatcgtcgagggcgactcggcgggcggctcggcggtcatgggccgcgagaac
cggatccaggcgatcctcccgatccgcggaaagatcctcaacgtcgagaaggcgcgcatc
gacaaggtgctggccaaccaggaggtccaggcgatcatctcggcgctcggcacgggcgtc
cacgaggagttcgacctcgacaagctgcgctaccacaagatcgtgctgatggccgacgcc
gacgtcgacggtcaccacatcaacaccctgctgctcaccctgctgttccggttcatgcgt
ccgctcatcgacgccggccacgtctacctcgcccagccgccgctgtaccggatcaagtgg
aacaagccccacgagcacgagttcgtctactccgacgccgagcgcgacgcggtcatgcgc
gacggcctcgagcagggcaagaagctccccaaggacgcgccgatccagcgctacaagggt
ctcggcgagatgaacgccgacgagctgtgggagaccacgctcgaccccgaccagcgggtg
ctgctgcaggtcaccctggaggacgccgcgcaggccgacgagatcttctcgatcctgatg
ggcgaggacgtcgagcagcgccgctccttcatccagcgcaacgccaaggacgtccgattc
ctcgatatctag
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