Nocardioides sp. QY071: QI633_03155
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Entry
QI633_03155 CDS
T10893
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nocq Nocardioides sp. QY071
Pathway
nocq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QI633_03155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nocq03021
]
QI633_03155
03400 DNA repair and recombination proteins [BR:
nocq03400
]
QI633_03155
Enzymes [BR:
nocq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QI633_03155
Transcription machinery [BR:
nocq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QI633_03155
DNA repair and recombination proteins [BR:
nocq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QI633_03155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WGY02761
LinkDB
All DBs
Position
671624..675502
Genome browser
AA seq
1292 aa
AA seq
DB search
MLDVNFFDQLQIGLATADDIRTWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITAVDEDARHRDLSSLEGKIQLQRESIEKRRDAGLEDRTKKLEDD
LATLEAEGAKADQRRKVRDGAERELKQLRDRAQRELDRLDEVWDTFKSLKVQDLMGDEVL
YREMKNWFGKYFEGHMGAAAIQKRLQSFDLDAEVESLRETIATGKGQRKVRALKRLKVVE
AFRKTGNKPEGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVSGPQLKLHQCGLPKQMALELFKPFVMKRLVDLSHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPSDGRPVTMPTQDMIIGLFFLTTERGEATVEID
GETRLRTFTSPAEAIMAYDRGEITLQDRVRIRLTNVALEGVEEGVTTLVETTLGRTIFND
ALPADYPYVNEEVGKKRLGSIVNDLAERYPKVVVAASLDALKDNGFHWATRSGVTVSIDD
VITPPNKAEILAVHEASAAKIQKQYERGLVTDEERRQELIEIWTKASQEVGKALRATFEA
NPTNPIYVQVHSGASGNFNQINQVGAMRGLVANPKGEIIPRPIKANFREGLSVLEYFIST
HGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLPKVIGVDDENGVVVKD
ENAETAAYARSAAKEITHPETGAVLAAAGEDLGDVKIAELIEAGIKEVTVRSVLTCDART
GTCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPR
VVELFEARTPKGHAQISEAAGRVQIEETDKARIIVVTPDDGSEVKEYPVSRRSRLLVEDG
GRVEVGDKFTAGTEDPKEVLRILGVRKTQQHLVDQVQEVYRSQGVSIHDKHIEIIVRQML
RRITVLESGDTNLLPSDLVDRVRFEEENRRVVSEGGKPASGRPELMGITKASLATESWLS
AASFQETTRVLTDAAINGRSDSLRGLKENVIIGKLIPAGTGLERYRNIRVEPTEEARAAA
YAVTGYESYDYEFGNQGQAVALDDFDFGSYQN
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgttaacttcttcgaccagcttcagatcggcctggccaccgcggacgacatc
cgcacgtggagccacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagcgtgacggcctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctcgaaggtccgccgtgagcggatgggccacatcgagctggccgcgccg
gtcacccacatctggtacttcaagggtgtcccgagccgcctcggctacctgctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcaccgccgtcgac
gaggacgcccgccaccgcgacctgtcctcgctcgagggcaagatccagctccagcgcgag
tcgatcgagaagcgccgcgacgccggcctcgaggaccgcaccaagaagctcgaggacgac
ctggccacgctcgaggccgagggcgccaaggccgaccagcgccgcaaggtgcgcgacggc
gccgagcgcgagctcaagcagctgcgcgaccgcgcccagcgcgagctggaccgcctcgac
gaggtctgggacacgttcaagagcctcaaggtccaggacctcatgggtgacgaggtcctc
taccgcgagatgaagaactggttcggcaagtacttcgagggccacatgggcgccgcggcg
atccagaagcgcctgcagtccttcgacctcgacgccgaggtcgagagcctgcgcgagacc
atcgccaccggcaagggccagcgcaaggtccgcgccctcaagcggctcaaggtcgtcgag
gccttccgcaagacgggcaacaagcccgagggcatggtcctcgacgccgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccggttcgcgacctccgacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcggctgctggacctg
ggcgcgccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgactcg
ctgttcgacaacggccgtcgtggtcgtcccgtcaccggcccgggcaaccggccgctgaag
tcgctgtccgacatgctcaagggcaagcagggtcgcttccgccagaacctgctcggcaag
cgcgtcgactactcgggccggtcggtcatcgtgtcgggtccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctcttcaagccgttcgtcatgaagcggctc
gtcgacctctcgcacgcgcagaacatcaagtccgccaagcggatggtcgagcgcgcgcgc
ccggtcgtgtgggacgtcctcgaagaggtcatcaccgagcacccggtgctcctcaaccgt
gcgcccaccctgcaccgcctcggcatccaggccttcgagccgcagctgatcgagggcaag
gccatccagctccacccgctcgtgtgcaccgccttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgccgaggcccaggccgaggcgcggatcctgatgctg
tcgaccaacaacatcctcaagccgtccgacggccgcccggtgaccatgccgacccaggac
atgatcatcggcctgttcttcctcaccaccgagcgtggcgaggcgacggtcgagatcgac
ggtgagacccgtctgcgcaccttcacgtccccggccgaggcgatcatggcctacgaccgt
ggcgagatcacgctgcaggaccgggtgcggatccgcctgaccaacgtcgcgctcgagggc
gtcgaggagggtgtgaccaccctggtcgagaccacgctgggccgcacgatcttcaacgac
gcgcttccggccgactacccgtacgtcaacgaggaggtcggcaagaagcgcctcggctcc
atcgtcaacgacctcgccgagcgctaccccaaggtcgtcgtcgcggcgtccctggacgcc
ctcaaggacaacggcttccactgggcgacccgctccggtgtgaccgtctcgatcgacgac
gtcatcacgcctcccaacaaggccgagatcctggccgtgcacgaggcgtcggcggccaag
atccagaagcagtacgagcgtggtctggtcaccgacgaggagcgccgccaggagctcatc
gagatctggacgaaggcgagccaggaggtcggcaaggccctgcgcgccaccttcgaggcc
aacccgaccaacccgatctacgtgcaggtgcactcgggcgcctcgggtaacttcaaccag
atcaaccaggtcggcgccatgcgtggtctggtggccaacccgaagggcgagatcatcccg
cggccgatcaaggccaacttccgcgagggtctctccgtgctggagtacttcatctccacc
cacggtgcccgcaagggtctggcggacaccgcgctgcggaccgccgactcgggctacctg
acccgtcgtctggtcgacgtgtcgcaggacgtcatcatccgcgaggaggactgcggcacc
gagcgcggcctgcccaaggtgatcggcgtcgacgacgagaacggtgtggtcgtcaaggac
gagaacgccgagaccgcggcgtacgcccgctcggccgccaaggagatcacccacccggag
acgggcgccgtgctcgccgccgcgggtgaggacctcggtgacgtcaagatcgccgagctc
atcgaggccggcatcaaggaggtcacggtccgctcggtcctgacctgcgacgcgcgcacc
ggcacctgcgcgaagtgctacggccgctcgctggccaccggcaagctcgtcgacatcggt
gaggccgtcggcatcatcgcggcgcagtccatcggtgagcccggcacgcagctgacgatg
cgtaccttccacaccggtggtgtggcctcggccgacgacatcacgcagggtctgccccgc
gtcgtcgagctcttcgaggcccgcacccccaagggtcacgcccagatctccgaggccgcc
ggccgcgtgcagatcgaggagaccgacaaggcccgcatcatcgtcgtcacccccgacgac
ggcagcgaggtcaaggagtaccccgtgtcccggcgctcccgcctcctcgtggaggacggc
ggccgggtcgaggtgggcgacaagttcaccgccggtacggaggacccgaaggaggtgctg
cgcatcctgggcgttcgcaagacccagcagcacctcgtcgaccaggtccaggaggtctac
cggtcgcagggtgtgtcgatccacgacaagcacatcgagatcatcgtgcggcagatgctg
cgccggatcacggtgctcgagtcgggtgacaccaacctgctcccgtccgacctcgtcgac
cgggtccgcttcgaggaggagaaccgccgcgttgtgtccgagggcggcaagccggcctcg
ggtcgtcccgagctcatgggcatcaccaaggcctcgctcgcgacggagtcgtggctctcg
gcggcctccttccaggagaccacccgggtcctcaccgacgccgcgatcaacggccgctcc
gacagcctgcgtggcctgaaggagaacgtgatcatcggcaagctgatcccggccggcacc
ggcctggagcgctaccggaacatccgggtcgagccgaccgaggaggcgcgcgcggcggcg
tacgccgtcacgggctacgagtcctacgactacgagttcggcaaccagggccaggccgtg
gcgctggacgacttcgactttggctcgtaccagaactga
DBGET
integrated database retrieval system
