Nocardioides sp. QY071: QI633_03190
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Entry
QI633_03190 CDS
T10893
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nocq Nocardioides sp. QY071
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocq03032
]
QI633_03190
03400 DNA repair and recombination proteins [BR:
nocq03400
]
QI633_03190
Enzymes [BR:
nocq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QI633_03190
DNA replication proteins [BR:
nocq03032
]
Prokaryotic type
DNA Topoisomerases
QI633_03190
DNA repair and recombination proteins [BR:
nocq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QI633_03190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WGY02768
LinkDB
All DBs
Position
682070..683023
Genome browser
AA seq
317 aa
AA seq
DB search
MARLRRTSPDEPGWTRRRAGRGFVHLGLDGRPLGAEDAARCKALVIPPAWTDVWICPRPN
GHLQAVGTDAAGRRQYLYHPDWVEQRAAQKHERVMTLGRRLPRIRKRVLADLDDDVGPQA
SCALAVRLIDLGCFRIGNDVYAEEYGSFGLTTLERQHVHRSGDVLVFEFTGKSGIEHHVE
IDDPVAVRALERRRRRRRKDPRLLDVTGTDVNDYLREVSGLEITAKDFRTWHGTVLAAAA
LAQAPGPEASKTARKRAVAAAMREVAEFLGNTPALARSAYVDPRVVDAYAEGRTIRVRAG
ATREQLERATLRLVGGR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtggcccggctgcgtcgtacctctcccgatgagccgggctggacccggcgccgggccggg
cgcggcttcgtccacctcgggctcgacggccgtccgctcggggccgaggacgcggcccgg
tgcaaggcgctggtgatcccgccggcctggaccgacgtgtggatctgcccgcgacccaac
gggcacctgcaggcggtgggcaccgacgcggccggacgacggcagtacctctaccacccg
gactgggtcgagcagcgggccgcgcagaagcacgagcgcgtcatgacgctgggacggcgg
ctgccccggatccgcaagcgggtgctcgccgatctcgacgacgacgtcggaccgcaggcg
agctgcgccctggcggtccggctgatcgacctgggctgcttccggatcggcaacgacgtg
tacgccgaggagtacggctcgttcgggctgacgaccctcgagcggcagcacgtgcaccgg
tccggggatgtgctcgtcttcgagttcaccgggaagtcggggatcgagcaccacgtggag
atcgacgacccggtcgcggtgcgcgccctcgaacggcggcggcgccggcgccggaaggac
ccgcggctgctcgacgtcaccggcaccgacgtcaacgactacctgcgcgaggtgagcggg
ctggagatcaccgcgaaggacttccgtacctggcacggcaccgtcctcgcggcagcggcg
ctcgcgcaggcgcccggcccggaggcgtcgaagacggcgcggaagcgtgccgtcgcggcg
gcgatgcgggaggtggccgagttcctcggcaacacgcccgccctggcccggtcggcgtac
gtcgacccgcgggtggtcgacgcctacgccgagggtcgcaccatccgggtccgcgccggc
gcgacccgcgagcagctggagcgggcgacgctgcggcttgtcggcggtcggtga
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