KEGG   Nocardioides sp. QY071: QI633_06140
Entry
QI633_06140       CDS       T10893                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
nocq  Nocardioides sp. QY071
Brite
KEGG Orthology (KO) [BR:nocq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nocq03032]
    QI633_06140
   03036 Chromosome and associated proteins [BR:nocq03036]
    QI633_06140
   03400 DNA repair and recombination proteins [BR:nocq03400]
    QI633_06140
DNA replication proteins [BR:nocq03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    QI633_06140
Chromosome and associated proteins [BR:nocq03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    QI633_06140
DNA repair and recombination proteins [BR:nocq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      QI633_06140
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267
Other DBs
NCBI-ProteinID: WGY03338
LinkDB
Position
complement(1300158..1300790)
AA seq 210 aa
MNKTQLIDALADRFGGSRREAAHALDAVLDTITRQVAKGERVAITGFGSFEKAVRNARWV
RNPQTGERVKTKKKSVPKFSAGAELKAVVAGARKPARPARPTRPDPGYGRAAATHAPAKK
AAAAVKKAPAKKAPAAVKKAPAKKAPAAVKKAPAKKAPAAVKKAPAKKAPAAVKKAPAKK
APAAVKKAPAKKAPAAVKKAPAKKAPAKKV
NT seq 633 nt   +upstreamnt  +downstreamnt
gtgaacaagacgcaactcattgatgccttggccgaccgattcggcggcagtcgcagagag
gcggctcacgcactggacgcggttctcgacaccattacccgccaggtcgccaagggcgag
agggtcgctatcacgggtttcggttccttcgagaaggctgtgcgcaacgcccgctgggtg
cgcaacccccagacgggcgagcgggtcaagacaaagaagaagtctgtgccgaagttcagc
gctggcgctgagttgaaggctgtcgttgccggtgcaaggaagccggcgaggcccgcgaga
ccgaccaggccggatccaggctacgggcgcgcagcggcgacacacgcccccgcaaagaag
gccgccgcggcggtcaagaaggcacccgcgaagaaggcccccgccgcggtcaagaaggca
cccgcgaagaaggcccccgccgcggtcaagaaggcacccgcgaagaaggcccccgccgcg
gtcaagaaggcacccgcgaagaaggcccccgccgcggtcaagaaggcacccgcgaagaag
gcccccgccgcggtcaagaaggcacccgcgaagaaggcccccgccgcggtcaagaaggca
cccgcgaagaaggcccccgcgaagaaggtctag

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