Nocardioides sp. QY071: QI633_07250
Help
Entry
QI633_07250 CDS
T10893
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nocq Nocardioides sp. QY071
Pathway
nocq03018
RNA degradation
Brite
Enzymes [BR:
nocq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
QI633_07250
Messenger RNA biogenesis [BR:
nocq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QI633_07250
Ribosome biogenesis [BR:
nocq03009
]
Prokaryotic type
rRNA processing factors
QI633_07250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WGY03554
LinkDB
All DBs
Position
1518677..1521589
Genome browser
AA seq
970 aa
AA seq
DB search
MTDAPTDTPTEIPAEAPADKVAKAEKPEKAAKPAKKAAAKKTTAKKTAAKKATAAKKTAA
KKTTAAKKTAAKKTTAAKKTTASRAKAKAAPTSEQLELTAEVEETAPEAAGALATAVLFQ
APVAPVGEVAVAPEVAAEPAEEEPAAEEPAAEEPAAEPETAEPETVDPEAVEPEAVEEPA
AEEAAAEESGEESGEESTDEDDDSEGDENGTGSGAARRRRRRGGRRRRKPAASAEGEDGG
SAEGDDAESAESTDQAKDGESAEGESAEGEESEEGAASGGSSSSRRRRRRRRAGEGGGDN
EGDDPENTVTRVRKPRSAEDEITAVSGSTRLEAKKQRRREGREAGRRRAPIVSEAEFLAR
RESVERVMAVRQRKDLTQIAVLEDKVLVEHYVARESQTSLIGNVYLGRVQNVLPSMEAAF
IDIGKGRNAVLYAGEVNWSALGHKDGEPRKIESVLQSGQTVLVQVSKDPIGHKGARLTSQ
VSLAGRFLVYVPDGTTSGISRKLPDTERSRLKTLLKEIVPDTAGVIVRTAAEGASEEELT
RDVERLKARWEDIEGKVAKGNAPQLLYGEPDLTLKVVRDLFTEDFAKLVVQGDDAWTTVK
EYVDQVAPDLTERLERHESGDGVPDLFSTYRIDEQISKGLDRKVWLPSGGSLIIDRTEAM
TVVDVNTGKFTGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDL
VLRRLVECLGRDRTRHQVAEVTSLGLVQMTRKRIGTGLLEAFSETCSHCQGRGIVVHDLP
VEPKRGGGEQDESRRGNRRRKGKGGGQGDNQAETPAEAPKAVPSPKDIAAMAKPADHDHD
NEQPDVEPVEPVVEEAAVEEAPVEETSVEVVESVEAVVEAPEPEPEPEPEPEPEPVPVAT
TTVVTRTRRRAATRPAGPPAEAAEPAADATPDATPDAGTDVGTDEASEDAHEEPHVEHVP
IKRKGGSRKR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgcccactgacacaccgaccgagatcccggccgaggcccccgccgacaag
gtggcgaaggcggagaagcctgagaaggccgcgaagccggccaagaaggcggcggccaag
aagaccaccgcgaagaagaccgccgcgaagaaggccaccgcggccaagaagacggctgcg
aagaagaccaccgcggccaagaagacggctgcgaagaagaccaccgcggccaagaagacg
accgcgagccgggcgaaggccaaggccgcgcccacctccgagcagctcgagctgaccgcc
gaggtcgaggagaccgctcccgaggccgccggggccctggccaccgccgtgctcttccag
gcgcccgtcgcccccgtgggggaggtggccgtcgcgccggaggtcgccgcggagcctgcg
gaggaggagcccgccgccgaggagcccgccgccgaggagccggctgccgagcctgagacc
gccgagcctgagaccgtcgatcctgaggccgtcgagcctgaggccgtcgaggagccggct
gccgaggaggcggctgccgaggagtcgggcgaggagtccggcgaggagtcgaccgacgag
gacgacgacagcgagggcgacgagaacggcaccgggagcggcgccgcccgccggcgccgt
cgccgaggtggccgtcgccgccgcaagccggccgcgagcgccgagggcgaggacggcggg
tccgccgagggtgacgacgccgagagcgccgagagcaccgaccaggccaaggacggcgag
tccgccgagggcgagagcgccgagggcgaggagtccgaggagggcgccgcgagcggcggg
tcctcctcgtcgcgccggcgccgccggcgccgccgcgccggcgagggcggcggcgacaac
gagggcgacgaccccgagaacaccgtcacccgggtccgcaagccccgttccgccgaggac
gagatcacggccgtgtcgggctcgacccgcctcgaggccaagaagcagcgccgccgcgag
ggccgcgaggccggccgccgccgggcgccgatcgtgagcgaggccgagttcctggcccgc
cgcgagtccgtggagcgcgtgatggcggtgcgccagcgcaaggacctcacccagatcgcg
gtgctcgaggacaaggtcctcgtcgagcactacgtcgcccgcgagtcgcagacctcgctc
atcggcaacgtctacctcggccgcgtccagaacgtgctgccctccatggaggccgcgttc
atcgacatcggcaagggccgcaacgccgtgctgtacgccggcgaggtcaactggagcgcg
ctgggccacaaggacggcgagccgcgcaagatcgagtcggtcctgcagtccggccagacc
gtgctggtccaggtgagcaaggacccgatcggccacaagggcgcccggctcaccagccag
gtcagcctcgccggccgcttcctggtctacgtcccggacggcaccacctccggcatctcc
cgcaagctgcccgacaccgagcgctcgcgcctcaagaccctcctcaaggagatcgtcccc
gacaccgccggcgtgatcgtgcgcaccgcggccgagggcgcctcggaggaggagctgacc
cgcgacgtcgagcggctcaaggcgcgctgggaggacatcgagggcaaggtcgcgaagggc
aacgccccacagctgctgtacggcgagccggacctcaccctcaaggtggtccgcgacctg
ttcaccgaggacttcgccaagctcgtcgtccagggcgacgacgcctggacgaccgtcaag
gagtacgtcgaccaggtggctcccgacctcaccgagcgtctcgagcgccacgagtccggc
gacggcgtcccggacctgttctcgacgtaccgcatcgacgagcagatctccaagggcctc
gaccgcaaggtctggctgccctcgggcggctcgctgatcatcgaccgcaccgaggcgatg
accgtcgtcgacgtcaacaccggcaagttcaccgggtcgggcggcaacctggaggagacg
gtcaccaagaacaacctcgaggccgccgaggagatcgtccgccagctccggctgcgcgac
atcggcggcatcatcgtcgtcgacttcatcgacatggtgctcgagtcgaaccgcgacctc
gtgctgcgccgcctcgtcgagtgcctgggccgcgaccggacccgtcaccaggtcgccgag
gtcacctcgctcggcctggtccagatgacccgcaagcggatcggcaccggcctgctcgag
gcgttcagcgagacctgctcgcactgccagggccgcggcatcgtggtccacgacctcccg
gtcgagcccaagcgcgggggaggcgagcaggacgagtcccgccgcggcaaccgccgtcgc
aagggcaagggcggcggccagggcgacaaccaggccgagacgcccgccgaggcgcccaag
gcggtgccgtcacccaaggacatcgccgcgatggccaagccggccgaccacgaccatgac
aacgagcagccggacgtcgagccggtcgagccggtcgtcgaggaggctgccgtcgaggag
gcacccgtcgaggagacgtccgtcgaggtcgtggagagtgtcgaggccgtcgtcgaggcg
ccggagcccgagccggagcccgagccggagcccgagccggagccggtccccgtggccacc
acgaccgtggtgacccggacccgccgccgcgcggccacccgccccgccggcccgccggcc
gaggccgcggagcccgccgccgacgcgacacccgacgcgacgcccgacgcagggaccgac
gtggggaccgacgaggcctccgaggacgcccacgaggagccgcacgtcgagcacgtcccg
atcaagcgcaagggcggctcgcgcaagcgctag
DBGET
integrated database retrieval system
