Nocardioides sp. QY071: QI633_10915
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Entry
QI633_10915 CDS
T10893
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nocq Nocardioides sp. QY071
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nocq03009
]
QI633_10915 (rimO)
Enzymes [BR:
nocq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QI633_10915 (rimO)
Ribosome biogenesis [BR:
nocq03009
]
Prokaryotic type
ribosomal protein modification factors
QI633_10915 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
PAS
Motif
Other DBs
NCBI-ProteinID:
WGY04259
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Position
2286883..2288340
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AA seq
485 aa
AA seq
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MTSTPTNPVSVALLTLGCARNDVDSEELAGRLAADGFTLVEDPEDADTVVVNTCGFVDAA
KKDSIDTLLAAADLKESGRPQAVVAVGCLAERYGEELADSLPEADAVLGFDDYQDISGRL
RSILAGERPHPHTPRDRRLLLPISPAERQAVVETAETAGFGADVDIAIPGRSAIRRRLDG
GPMAPLKLASGCDRRCTFCAIPMFRGSFVSRRPSDVLQEAHWLAEQGVKELFLVSENSTS
YGKDLGDLGLLETLLPELTGIDGIERVRVSYLQPAETRPGLVRAIATTPGVAPYFDLSFQ
HASATVLRRMRRFGDPESFLGLLEQVRGLAPEAGVRSNVIVGFPGETEEEFQTLCDFLVA
ARMDVTGVFGYSDEDGTEAEKLDGKLDEDEINARVQHLNDLVSELTSQRAEERIGSTVEV
LVEELDPDGTGDGTIEGRAAQQGPEVDGTTRVLGAPDARVGDLVTAVVIATDGVDLIAEP
AGGQG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcacacccacgaaccccgtctcggtcgcgctgctcaccctcgggtgcgcgcgc
aacgacgtcgactccgaggagctggccggccgcctcgccgcggacggcttcacgctcgtc
gaggaccccgaggacgccgacacggtcgtggtcaacacgtgcggcttcgtcgacgcggcc
aagaaggactcgatcgacaccctgctcgctgccgccgacctcaaggagtcgggccggccg
caggccgtcgtggcggtgggctgcctggccgagcggtacggcgaggagctcgccgactcg
ctgcccgaggccgacgccgtgctgggcttcgacgactaccaggacatctccggccgcctg
cgctcgatcctggccggcgagcggccgcacccgcacaccccgcgcgaccggcggctgctg
ctgccgatcagccccgctgagcggcaggcggtcgtcgagacggccgagaccgccgggttc
ggcgccgacgtcgacatcgccatccccggccgctccgccatccggcgccgcctcgacggc
ggcccgatggccccgctcaagctcgccagcggctgcgaccggcgctgcaccttctgcgcg
atccccatgttccgcggctcgttcgtcagccgccggccctccgacgtcctgcaggaggcg
cactggctcgccgagcagggcgtcaaggagctgttcctcgtctcggagaactccacgtcc
tacggcaaggacctcggcgacctcggcctgctcgagacgctgctgcccgagctgaccggg
atcgacggcatcgagcgggtccgggtctcctacctgcagcccgccgagacccgccccgga
ctggtccgcgccatcgcgaccacccccggcgtggcgccgtacttcgacctgtcgttccag
cacgccagcgccacggtgctgcgccggatgcgccgcttcggcgacccggagagcttcctc
ggcctgctcgagcaggtacgcggactcgcgcccgaggcgggcgtgcgctccaacgtcatc
gtcggcttccccggcgagaccgaggaggagttccagacgctgtgcgacttcctggtcgcc
gcgcggatggacgtgaccggtgtgttcggctactccgacgaggacggcaccgaggccgag
aagctcgacggcaagctcgacgaggacgagatcaacgcccgcgtccagcacctcaacgac
ctggtctccgagctcacctcgcagcgcgcggaggagcggatcggcagcaccgtcgaggtg
ctcgtcgaggagctcgaccccgacggcaccggtgacggcaccatcgagggacgcgccgcc
caacagggccccgaggtcgacggcaccacccgggtgctcggcgcgcccgacgcgcgtgtg
ggtgacctcgtcaccgcggtcgtcatcgccaccgacggcgtcgacctgatcgccgaaccc
gcaggaggacagggatga
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