Nocardioides sp. QY071: QI633_13230
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Entry
QI633_13230 CDS
T10893
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nocq Nocardioides sp. QY071
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nocq03051
]
QI633_13230 (pafA)
Enzymes [BR:
nocq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
QI633_13230 (pafA)
Proteasome [BR:
nocq03051
]
Prokaryotic proteasome
Bacterial regulatory particles
QI633_13230 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WGY04704
LinkDB
All DBs
Position
complement(2745800..2747161)
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AA seq
453 aa
AA seq
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MDRRIFGIENEYGVTCTFRGQRRLSPDEVARYLFRKVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDDVAELVTHDKAGERVLEGLLLDAEQRLHDEGIAGEIYLFKNNTDSAGNSY
GCHENYLVSRAGEFSRLADVLIPFLVTRQIIVGAGKVTQTPRGTSYSVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVASCDLVLRMIEEGVVM
RDLTMENPIRAIREISHDVTGRRKVRLANGREASALDIQGEYLSKARDFVDRRGLSTPII
ERALDLWERGLKAVESDDLSLVDREIDWVIKWKLIDRYRAKHGIPLSHPRVAQLDLAYHD
IHRGRGLYYLLEKRGAVARVTSDLKIFEAKSVPPQNTRARLRGEFIRRAQERRRDFTVDW
VHLKLNDQAQRTVLCKDPFRAYDERVQRLIDGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcggatcttcgggatcgagaacgagtacggcgtcacgtgcacgttccgcggg
cagcgtcggctcagccccgacgaggtcgcgcgctacctgttccgcaaggtcgtcagctgg
ggtcgcagcagcaacgtgttcctgcgcaacggggcccgcctctacctcgacgtgggcagc
cacccggagtacgccacgcccgagtgtgacgacgtcgccgagctcgtcacgcacgacaag
gcgggggagcgggtcctcgaggggctgctgctggacgccgagcagcggctgcacgacgag
gggatcgccggcgagatctatctcttcaagaacaacaccgactcggccggcaactcctac
ggctgccacgagaactacctcgtctccagggccggcgagttcagccggctggccgacgtg
ctcatcccgttcctggtgacccgccagatcatcgtgggcgccggcaaggtcacccagacg
ccccggggcacgagctactcggtgagccaacgcgccgagcacatctgggagggcgtgagc
agcgcgaccacgcgcagccgcccgatcatcaacacccgcgacgagccgcacgccgacgcg
gagaagtaccgccgtcttcacgtcatcgtcggcgactcgaacatgagcgagacgaccacg
atgctcaaggtcgcctcgtgcgacctggtgctgcggatgatcgaggagggcgtggtgatg
cgcgacctcacgatggagaacccgatccgggcgatccgcgagatctcccacgacgtcacc
ggccgtcgcaaggtccgcctcgccaacggccgcgaggcgagcgcgctcgacatccagggc
gagtacctctccaaggcgcgcgacttcgtcgaccggcgcggcctctcgacgccgatcatc
gagcgggccctcgacctgtgggagcgcggcctcaaggccgtcgagtccgacgacctcagc
ctggtcgaccgcgagatcgactgggtcatcaagtggaagctcatcgaccgctaccgcgcc
aagcacggcatcccgctgagccacccgcgcgtcgcccagctcgatctcgcctaccacgac
atccaccgcggccgcggcctctactacctgctggagaagcgcggcgccgtcgcgcgggtg
accagcgacctcaagatcttcgaggccaagtctgtcccgccgcagaacacccgtgcccgg
cttcgtggcgagttcatccgccgcgcgcaggagcggcggcgcgacttcacggtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcgcaccgtgctctgcaaggacccgttccgg
gcgtacgacgagcgggtgcaacgccttatcgacggcatgtga
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