Nocardioides sp. QY071: QI633_16055
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Entry
QI633_16055 CDS
T10893
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nocq Nocardioides sp. QY071
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nocq03016
]
QI633_16055 (truB)
Enzymes [BR:
nocq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QI633_16055 (truB)
Transfer RNA biogenesis [BR:
nocq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QI633_16055 (truB)
Prokaryotic type
QI633_16055 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WGY00049
LinkDB
All DBs
Position
complement(3319012..3319884)
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AA seq
290 aa
AA seq
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MVAKPAVPSGLVVVDKPAGMTSHAVVSRVRRAVGTRKVGHAGTLDPMATGVLVLGVERAT
RLLGHLMLTEKAYDATVRLGASTTTDDAEGELVTATPTGHLELAAVRARFATQVGEILQV
PTAVSAIKVDGKRAYQRVRDGEEVELDARPVTVHELTVHDQRVVGDYLDVDITVRCSSGT
YIRAIARDVGAALGVGGHLTALRRTAVGPFTLDGAVTDLDDVTVTPLADAARASFPALDL
DAGQAQAVRYGRPLPLAIDALTGVFAPDGEFLALYRPEGGAARPAAVFVG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggtggccaagcccgccgtgccgtcgggcctggtcgtcgtcgacaagcccgccggcatg
acctcgcacgccgtcgtgtcccgcgtgcgccgggcggtcggcacccgcaaggtcggccac
gccggtaccctcgacccgatggcgacgggggtgctggtgctcggcgtcgagcgcgccacc
cggctgctcgggcacctcatgctcaccgagaaggcgtacgacgccacggtgcggctcggc
gcctcgaccaccaccgacgacgccgagggtgagctcgtcaccgcgacgccgacgggtcac
ctcgagctcgcggccgtccgcgcccggttcgcgacccaggtcggcgagatcctccaggtg
ccgacggccgtcagtgcgatcaaggtcgatggcaagcgcgcctaccagcgggtccgcgac
ggcgaggaggtcgagctcgacgcgcggccggtgaccgtccacgagctgaccgtccacgac
cagcgggtcgtgggggactacctcgacgtcgacatcacggtccgctgctcgagcggcacc
tacatccgcgcgatcgcgcgtgacgtcggcgccgcgctcggcgtgggcggtcacctgacc
gcgctgcgtcgtaccgccgtcgggccgttcaccctcgacggcgcggtcaccgacctcgac
gacgtcaccgtgaccccgctcgccgacgcggcgcgcgcgagcttccccgcgctcgacctc
gacgccggccaggcgcaggcggtccgctacggccggccactgccgctcgccatcgacgcg
ctcaccggggtgttcgcccccgacggcgagttcctcgcgctctaccgtcccgagggcggc
gcggcgcgcccggcggccgtcttcgtcggctga
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