Nocardioides sp. QY071: QI633_16250
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Entry
QI633_16250 CDS
T10893
Name
(GenBank) DEAD/DEAH box helicase
Organism
nocq Nocardioides sp. QY071
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
WGY00086
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Position
3357618..3360800
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AA seq
1060 aa
AA seq
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MDVLAELTDDFLARHFDAGTLERARSIVAAGGVRRPEIGMRSAASVTATAEVLGSREAPY
QVQLHVEAPNASYAGWVFTVCTCPVRSVCKHGAALALSLRQTFTQPAGEAAWRRSVERLV
GELARQQPSVREEVPLALEVTLDRGRGSYRAAGPTLRVRPLRQGKSKPWIKSGAEWNDVA
GSPRGFVQRQADALAALHTQWAGHRGYYSAGVSPALDEFGDQVVRALRNARDAGVTLLAA
RPLVSVEVADEPAEVVAELGDVDGGTTMRAVVTLAERTWRDESVVLVGSPASVVGLLDDS
GHLLIAATTTPVPPALRHLVDGPPILVPPADLADFRETLPGLMRLVPVRADASSVELPEP
LSPTLVLTVSWHTSTKAGLAWHWQYGADPERSCPLTSSDSLGGVRDRAAEQALLATVPPA
LLQVSTLIDGDALTLAIHDLPHLRETEGVRVVEEERPDFREADVAPEIRFDLVEPDSSTT
SSTTDWLDLAVTVSVDGEQIPLPDVLAALTLDLEFLVLPSGLYVTTDRPEFDRLREVVTA
AAELREREGDRIGIGHHDLGLWAQLAETGLVDAQVAAWVERARALRDLTDIPRPEPRGLV
TDLRSYQREGFWWLAFLWQHGLGGVLADDMGLGKTLQVLALITHARAQRPLDAPFLVVAP
TSVVTAWATETARHAPGLRVAVASRRTDDVAALARDHDVVVTTYTLLRLAHEEYADLAWS
GLVLDEAQQAKNHQSKTYQAIRTIDAPFRLAVTGTPFENRLMELWSLLSITVPGLYPWPR
TFQDKVVRPVERDGDQVVLDRFRARIRPFLLRRTKELVADDLPPKQEQVLQVDLDAAHRR
IYDTHLAKERQRILGLVEDFDRNRVAIFSALTKLRQLALDPALVDDEHESVGSAKLDVLV
EHLAEITAEGHRALVFSQFTSFLTRVRSRLDDVGIATTYLDGTTRDRAGVIDRFRSGASP
VFLISLKAGGTGLTLTEADYVFVLDPWWNPAAEAQAVDRAHRIGQTRHVHVYRLVATDTI
EEKVMELKARKAELFAQVIDGDGAMSTSIGAEDIRGLFEE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtcctcgccgagctgaccgacgacttcctggcgcgccacttcgacgccgggacg
ctggagcgtgcccgctcgatcgtcgctgcgggcggcgtccggcgtcccgagatcgggatg
cgctcggcggcgtcggtcacggcgacggcggaggtcctcgggagccgggaggcgccgtac
caggtccagctgcacgtcgaggcacccaacgcgagctacgccggctgggtgttcacggtg
tgcacctgcccggtgcgctcggtgtgcaagcacggcgccgcgctggcgctgagcctgcgc
cagaccttcacccagccggccggcgaggccgcgtggcgacgctcggtggagcggctggtc
ggcgagctggcgcgccagcagccgtcggtgcgcgaggaggtgccgctcgcgctggaggtg
accctcgaccgcggtcgcggcagctaccgcgccgccggcccgacgctgcgggtccggcca
ctgcggcagggcaagagcaagccgtggatcaagagcggcgccgagtggaatgacgtcgcc
ggcagcccgcgcggcttcgtgcagcggcaggccgacgcgctcgccgcgctgcacacccag
tgggccggccaccgcggctactactccgccggggtctcccccgcgctcgacgagttcggc
gaccaggtggtccgcgccctgcgcaacgcccgcgacgccggcgtcaccctgctggccgcc
cggccactggtctcagtcgaggtcgccgacgagccggccgaggtggtcgccgagctcggc
gacgtcgacggcggtacgacgatgcgcgcggtcgtcaccctcgccgagcggacctggcgc
gacgagtccgtggtgctggtcggctcccccgcgtcggtcgtcggcctgctcgacgacagc
ggccacctcctcatcgccgcgaccacgaccccggtgccgcccgcgctgcgccacctggtc
gacggcccgccgatcctggtcccgcccgccgacctggccgacttccgcgagacgctgccc
gggctgatgcggctggtgccggtgcgcgcggacgcgtcgtcggtcgagctgcccgagccg
ctgtcgccgacactggtgctgaccgtctcgtggcacacctccaccaaggcgggcctggcg
tggcactggcagtacggcgccgacccggagcgcagctgcccgctcaccagcagcgactcc
ctcggcggggtcagggaccgtgccgcggagcaggcactgctcgcgaccgtgccgccggcg
ctgctgcaggtctcgacgctcatcgacggcgacgccctcaccctggccatccacgacctg
ccgcacctgcgcgagacggagggcgtgcgggtcgtcgaggaggagcggcccgacttccgc
gaggccgacgtggcgcccgagatccggttcgacctggtcgagcccgactccagcacgacg
tccagcacgaccgactggctcgacctggccgtgaccgtcagcgtcgacggcgagcagatc
ccgctgcccgacgtcctcgccgccctcaccctcgacctggagttcctcgtgctgccgagc
gggctctacgtgaccaccgaccgccccgagttcgaccggctgcgcgaggtggtcaccgcg
gccgccgagctgcgcgagcgcgagggcgaccggatcggcatcggccaccacgacctcggc
ctgtgggcccagctcgccgagaccggtctcgtcgacgcccaggtcgccgcgtgggtcgag
cgggcccgggcgctgcgggacctcaccgacatcccgcgacccgagccgcgcggcctggtc
accgacctgcgcagctaccagcgcgagggcttctggtggctggcattcctgtggcagcac
ggcctcggcggtgtgctcgccgacgacatgggtctcggcaagacgctccaggtgctcgcc
ctcatcacccacgcccgcgcccaacgtcctctcgacgcgcccttcctcgtcgtcgccccg
accagcgtcgtcaccgcctgggccaccgagaccgcccggcacgcgccgggcctgcgcgtc
gcggtggcctcgcgtcgtaccgacgacgtggcggcgctggcccgcgaccacgacgtggtc
gtcacgacgtacaccctgctccggctggcccacgaggagtacgccgacctggcctggtcc
gggctggtgctcgacgaggcacagcaggccaagaaccaccagagcaagacctaccaggcg
atccgcaccatcgacgcgccgttccgcctcgccgtcaccggcacgccgttcgagaaccgg
ctgatggagctgtggtcgctgctctcgatcacggtgcccggcctgtacccctggccgcgc
acgttccaggacaaggtcgtgcggccggtcgagcgcgacggcgaccaggtcgtgctcgac
cggttccgagcccggatcaggccgttcctgctgcggcgcaccaaggaactggtcgccgac
gacctgccgcccaagcaggagcaggtcctccaggtcgacctcgacgccgcgcaccgcagg
atctacgacacccacctggccaaggagcggcagcggatcctcggcctggtcgaggacttc
gaccgcaaccgggtcgccatcttcagcgcgctgaccaagctgcgccagctcgccctagac
cccgcgctcgtcgacgacgagcacgagagcgtcggctccgccaagctcgacgtgctcgtc
gagcacctcgccgagatcacggccgagggccaccgggctctggtgttcagccagttcacg
tccttcctcacccgggtccgctcgcgcctcgacgacgtggggatcgcgacgacctacctc
gacggcacgacccgcgaccgcgcgggcgtcatcgacaggttccgctccggtgcctccccc
gtcttcctcatctccctcaaggccggcggcaccggcctgaccctcaccgaggccgactac
gtcttcgtgctcgacccgtggtggaaccccgccgccgaggcgcaggccgtcgaccgcgcc
caccggatcggccagacgcgccacgtccacgtctaccggctggtcgcgaccgacaccatc
gaggagaaggtgatggagctcaaggcccgcaaggccgagctgttcgcacaggtcatcgac
ggcgacggagcgatgagcacgtcgatcggggccgaggacatccgcggtctgttcgaggag
tga
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