Nocardioides sp. QY071: QI633_18445
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Entry
QI633_18445 CDS
T10893
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nocq Nocardioides sp. QY071
Pathway
nocq03420
Nucleotide excision repair
nocq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QI633_18445
03430 Mismatch repair
QI633_18445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocq03400
]
QI633_18445
Enzymes [BR:
nocq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QI633_18445
DNA repair and recombination proteins [BR:
nocq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QI633_18445
MMR (mismatch excision repair)
Other MMR factors
QI633_18445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WGY00514
LinkDB
All DBs
Position
complement(3822577..3824652)
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AA seq
691 aa
AA seq
DB search
MSESIERLLSALDPEQRQVAETLRGPVRVLAGAGTGKTRAITHRIAHGVMSRVYAPTEVL
AVTFTTRAAGELRQRLRQLGAPGVQARTFHSAALRQLRYFWPHVHGTELPTLTESKIPML
AAACRHLGMRAEQALLRDLASEIEWAKVSNVGADDYPRIAPAKGRSVSDQTPEAIGRVID
AYELVKRDQGRMDMEDVLLLTAGVLASDERVAAQVRRQYKWFVVDEFQDVSPLQSALLDL
WLGGRDELCVVGDPAQTIYSFAGADADYLRDFPKRYPGTTSIELVRNYRSTPQVVETANT
LLAGTPSAGVDLRSQQKPGSAVRFQGEPDEVAEARSVADRILRLQRAGTPYGEMAVLFRI
NAQSETFEDALADRGIPYIVRGAARFFERREVLEAVTRLRGAARSGESDDSPWLDVVKDV
LGAMGWTAEPPTSRGQVRDRWESFQALADQAEEFATERGIEASIAAFVEELDRRASEQHA
PSADGVTLATFHAAKGLEWDAVFCCGVQDGTVPIVYAEQGGARPDAVEEERRLLYVGVTR
ARRDLMVSWAAARNPGQAPRRQPSRFIVPMLPASQQPQQSRGRTKVARCRDCLQPLTTAA
EKKRGRCAHHPVRYDEALFDRLKAWRLETAREAGEDGKPLPAYVVFTDATLELIAEHKPA
SMAALAKVNGVGPSKIERYGDAVLALVADGG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtccatcgaacggctcctctccgcgctcgacccggagcagcggcaggtcgcg
gagacgctgcgggggccggtgcgggtgctggccggtgccgggacgggcaagacgagggcg
atcacccaccgcatcgcgcacggcgtgatgtccagggtctacgcgccgacggaggtcctg
gcggtcaccttcaccacccgcgccgccggtgagctgcgccagcggctgcgacagctgggg
gcgccgggcgtgcaggcgcggaccttccacagcgcggcgctgcgccagctgcgctacttc
tggccccacgtccacggcaccgagctgccgacgctgaccgagtcgaagatcccgatgctc
gccgccgcctgccgccacctcgggatgcgggccgagcaggccctgctgcgcgacctcgcc
tccgagatcgagtgggccaaggtcagcaacgtcggggccgacgactacccgcggatcgcg
ccggccaagggccgctcggtctccgaccagacgcccgaggcgatcggccgcgtgatcgac
gcctacgagctggtcaagcgcgaccaggggcggatggacatggaggacgtgctgctgctg
accgcgggcgtgctggcctccgacgagcgggtcgcggcgcaggtgcggcggcagtacaag
tggttcgtcgtcgacgagttccaggacgtctcgccgctccagtcggcgctgctcgacctg
tggctcggcgggcgcgacgagctgtgcgtggtcggcgacccggcgcagacgatctacagc
ttcgccggggccgacgccgactacctgcgcgacttcccgaagcgctacccgggcaccacc
tcgatcgagctggtgcgcaactaccgctcgacgccgcaggtggtcgagaccgccaacacc
ctgctcgcgggcacgcccagtgccggcgtcgacctgcgctcgcagcagaagccgggctcg
gcggtgcgcttccagggggagcccgacgaggtggccgaggcgcgcagcgtcgccgaccgg
atcctgcggctgcagcgcgccgggacgccgtacggcgagatggcggtcctgttccgcatc
aacgcccagtccgagaccttcgaggacgcgctggccgaccgcgggatcccctacatcgtg
cgcggcgcggcgcggttcttcgagcggcgcgaggtgctcgaggcggtgacccggctgcgg
ggagccgctcgctcgggcgagagcgacgacagcccgtggctcgacgtggtcaaggacgtc
ctgggtgcgatgggctggacggccgagccgccgacctcgcgcggccaggtccgtgaccgc
tgggagtccttccaggcgctggccgaccaggccgaggagttcgccacggagcgtggcatc
gaggcgtcgatcgccgccttcgtcgaggagctcgaccggcgcgcgagcgagcagcacgcg
ccgagtgccgacggcgtgaccctggcgaccttccacgccgccaagggcctggagtgggat
gccgtgttctgctgtggcgtccaggacggcaccgtgccgatcgtgtacgccgagcagggc
ggcgcgcgccccgacgcggtcgaggaggagcggcgcctgctctacgtcggcgtgacccgc
gcccgccgcgacctgatggtgtcgtgggcggccgcccgcaacccggggcaggcgccgcgc
cgccagccgtcgcggttcatcgtgccgatgctgccggcgagccagcagccgcagcagtcc
cgtggccgcaccaaggtcgcccgctgccgcgactgcctccagccgctgaccacggcggcg
gagaagaagcgcgggcgctgcgcgcaccacccggtccgctacgacgaggcgctgttcgac
aggctcaaggcgtggcgcctggagaccgcgcgggaggccggcgaggacggcaagccgctg
cccgcgtacgtcgtgttcaccgacgccaccctcgagctgatcgccgagcacaagccggcc
tcgatggccgcgctggcgaaggtcaacggggtgggcccgagcaagatcgagcgctacggc
gatgcggtgctcgcgctggtcgccgacgggggctga
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