Nocardioides sp. QY071: QI633_24080
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Entry
QI633_24080 CDS
T10893
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
nocq Nocardioides sp. QY071
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nocq03000
]
QI633_24080
Transcription factors [BR:
nocq03000
]
Prokaryotic type
Helix-turn-helix
Other families
QI633_24080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
HTH_30
HTH_50
HTH_23
HTH_22
UPF0758_N
MCM
dCMP_cyt_deam_1
Motif
Other DBs
NCBI-ProteinID:
WGY01602
LinkDB
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Position
4996319..4997929
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AA seq
536 aa
AA seq
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MATGTEELRDPIAQSWQRAAMAGLTPGSALDHVTYSDVDTSGPLLSAASEVLDDLNDQLQ
GTMFSTLLVDREGRIAQRWCGDRGGRRAFDHLGLDVGASLLEEAVGTNALGTVLETRTSI
SINGSEHFAVPLRRFSCYGHPIFHPTTRRIEGVLDITALMEEASPLLPPLVARAVADIEQ
RLLDRSRVSDKQLLAAFQAAGTRRRAVVAIGQDLFMSNQAASDLLGSTDVALLRMLVGDL
HDNADVDLTLESGLEVRVEASRVGGARGGALLHVEPRRELRVAPHPFRPDLAHAPVLVSG
PPGSGRSTEARRASEVQPVTVLTAASALLDGAEAWARNFGALVRAGQGTVCVDGVDLLPD
DLVDLVASHLAERRAPRLVLVCGPVDGLSGRAAALAGECTERRVLTSLSSRPHELPELVR
RMLRELGADPSLHFTPGALRALSAQPWPGNLRELRAVVDHVARHQRTGAVVLDQLPEAYR
AQEPTKRLAPIEHAERAVIVEALREHGGNKVKAAQSLGISRTTLYAKMRALRITVY
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
gtggcgactggaaccgaggagctccgcgacccgatcgcgcagtcgtggcagcgcgccgcg
atggccgggctgaccccgggcagtgcgctggaccacgtgacctacagcgacgtcgacacg
tccggtcccctgctctccgcggcatcggaggtgctcgacgacctcaacgaccagctgcag
gggacgatgttctccacgttgctggtggaccgcgagggccggatcgcccaacgctggtgc
ggcgaccgcggcggccgccgggccttcgaccacctcgggctcgacgtgggcgcctcgctc
ctggaggaggccgtgggcaccaacgccctcggcaccgtgctggagacccggacgagcatc
tcgatcaacggcagcgagcacttcgcggtcccgctgcggcggttcagctgctacggccac
ccgatcttccatccgaccacgcgccggatcgagggagtcctcgacatcaccgcgctgatg
gaggaggcgagtcccctgttgccgcccctcgtggctcgcgcggtcgccgacatcgagcag
cgactgctcgaccgcagccgcgtctccgacaagcagctgctcgcagccttccaggcggcc
gggacccggcgccgcgcggtcgtggcgatcgggcaggacctcttcatgtcgaaccaggcg
gcctccgacctgctcggctcgaccgacgtcgccctgctgcggatgctcgtcggcgacctg
cacgacaacgccgacgtcgacctgaccctcgagtccgggttggaggtccgggtcgaggcc
agtcgggtcggcggggcccgcggaggtgcgctgctccacgtcgagccgcgccgcgagctc
cgggtggccccgcacccgttccgtccagacctcgcccacgcgcccgtgctggtctccggt
ccccccgggtccggccgctccaccgaggcgcgccgcgcgagcgaggtccagccggtcacg
gtcctcaccgccgcctcggcgctgctcgacggcgccgaggcgtgggcgcggaacttcggc
gccctggtccgcgccggtcagggaaccgtctgcgtcgacggcgtcgacctgctccccgac
gacctcgtcgacctcgtcgcctcacacctcgcggaacgacgggccccgcggctggtgctg
gtgtgcggccccgtcgacggcctgtcggggagggccgccgcgctcgccggcgagtgcacc
gagcgtcgggtgctgacgtccttgtcgagtcggccgcacgagctgcccgagctggtccgg
cggatgctcagggagctcggtgcggacccctcgctgcacttcacgccgggcgcgctgcgc
gccctctcggcccagccgtggcccggcaacctgcgcgagctgcgggccgtcgtcgaccac
gtcgcccgccaccaacgcaccggcgcggtcgtgctcgaccagctgcccgaggcctaccgg
gcccaggagccgaccaagcggctcgccccgatcgagcacgccgagcgggccgtcatcgtc
gaggcactgcgcgagcacggcggcaacaaggtgaaggcggcgcagtcgctgggcatctcg
cgcaccaccctctacgcgaagatgcgggcgctgcggatcacggtctactga
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