Nocardioides sp. QY071: QI633_24690
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Entry
QI633_24690 CDS
T10893
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nocq Nocardioides sp. QY071
Pathway
nocq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QI633_24690 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocq03400
]
QI633_24690 (recC)
Enzymes [BR:
nocq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QI633_24690 (recC)
DNA repair and recombination proteins [BR:
nocq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QI633_24690 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WGY01719
LinkDB
All DBs
Position
complement(5135964..5139368)
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AA seq
1134 aa
AA seq
DB search
MTLHLHRAARTDLLADELGGLLASPLADPFASEVVVVPAKGVERWLTQRLSHRLGAGPSG
GDGVCAGVRFLQPASLVGMLLGRDRDDPWHPDRLVWPLLATIDDSLDEPWCATLATHLGH
GLDGEEGELRRSRRWSVARRLAELFASYAVQRPALVRDWREGRDTDGAGSVLAPDLVWEA
ELWRRLLARMAAAGHDEAPDVRHDRVCAALRAGEVAGLDLPDRLSLFGHTRLPETEIDLL
VALASHRDVHLWLAQPSAALWAAVAEAGMELGPRDGSTSAELAHHPLLASLGRDARELAT
VLGARVRTGEASDSGAAPDPEAPDDLLGWLQSDLRANLALSAEERAGRVLRAEDRSLQVH
ACHGPARQVEVLRELLVGLLEDDLTLEPRDIVVMCPDVETYAPLISAGFGMGELIGDGPG
GPGDAGLHPAHQLRVRLADRASTSTNPLLAVAVVLVELAGGRATASQVLDLLARPVCRRR
FGFTDDDLARMTRWVAEAGVRWGIDASQRAAYAMDGFEHNTWRAGLDRLLLGVAMSDDEH
RHVGRGLPVDDIASGEIELVGRMSEAVARLGACLGALDAATAAEQWFAALAEGVRDLCEV
EDDDAWQLPQFERELARARASADESDADNTGVPLRLADVRALLQARLAGRPTRANFRTGT
LTVCTMVPMRSVPHRVVCLVGLDDGVFPRTSGVNGDDVLGRRPRVGERDLRGEDRQLLLD
AILAAGERLVVTYTGAAEHTGQERPPAVPLGELLDALDRTAAAPVRDRVVVRHPLQGFDP
RNHVPGELVGSEPFSFDRASLAGARASVRERTPVPSFLSGPLTTRPQQDVSLADLVDFVL
RPARTFLRGRLDVATPFEPGEVADAIPVDLDNLEKWAIGDRLLRAVLSSEDPGTTGEAVM
LAEQLRGSLPPFGLGHGALAEVVRDCQALLQQSAPLRAAPARSVDVDVDLGGGRRLTGTV
PRIHGNQLVDVTYSRPGPKQRIASWLRVVALSASHPDENWSSHAIARAKGGPQRALAGPL
DHRALEWLGAVVALYDEGAVRPLPIPLKTAHAWAEARAKELRGMDIDPVEAAGRAWRTDP
FNPFGITGEDDDAVHRRIWGHDAPVSVLIDAGLPSYAWTLWEPLLAGAEKVGPL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaccctccacctgcaccgcgccgcgcggaccgacctgctcgccgacgagctcggcggg
ctgttggcgagcccgctggccgacccgttcgccagcgaggtcgtggtggtgccggcgaag
ggcgtcgagcggtggctcacccaacgtctctcgcaccgtctcggtgccggaccgtcgggc
ggtgacggcgtgtgcgcgggggtccgcttcctgcagcccgcgtcgctggtcggcatgctg
ctcggccgcgaccgtgacgacccgtggcatcccgatcgcctggtctggccgctgctggcg
accatcgacgactcgctcgacgagccgtggtgcgcgaccctggcgacccacctcggtcac
ggcctcgacggcgaggagggcgagctgcgccgcagccgccggtggtcggtggcgcgacgg
ctcgcggagctgttcgcgtcgtacgccgtccagcgtcccgcgctggtccgcgactggcgc
gagggccgcgacaccgacggggccgggtcggtgctggcgccggacctggtgtgggaggcc
gagctgtggcgccggttgctcgcgcggatggccgcggcggggcacgacgaggcgcccgac
gtacgccacgaccgggtgtgcgcggcgctgcgggccggtgaggtcgccggcctggacctg
cccgaccggctgtcgctgttcggccacacccggctgcccgagaccgagatcgacctgctc
gtggcactggcctcccaccgcgacgtgcacctgtggctcgcccagccgtcggccgcgctg
tgggctgcggtggccgaggccgggatggagctggggccgcgcgacgggtccacctccgcc
gagctggcgcaccatccgctgctggcctcgctcgggcgcgacgcccgcgagctggcgacg
gtgctgggtgcacgggtgcggacgggggaggcctccgactcaggtgcggcgcccgacccc
gaggctcccgacgacctgctcggctggctgcagtccgacctccgggccaacctggccctg
tccgccgaggagcgggccggccgcgtgctgagggccgaggaccgctcgctgcaggtgcac
gcctgccacggtccggcgcggcaggtcgaggtgctgcgcgagctgctcgtcggcctgctc
gaggacgacctgaccctcgagccgcgcgacatcgtcgtgatgtgccccgacgtcgagacg
tacgcgccgctgatctccgccggcttcggcatgggcgagctgatcggtgacggcccgggc
ggcccgggtgacgccggactgcaccccgcccaccagctgcgggtccgcctcgccgaccgt
gccagcaccagcaccaacccgctcctcgccgtcgcggtcgtgctcgtcgagctcgcgggc
ggccgggcgacggcgtcccaggtgctcgacctgctggcccggccggtgtgccggcgccgg
ttcgggttcaccgacgacgacctcgcgcggatgacccggtgggtcgccgaggccggcgtg
aggtgggggatcgacgcgagccagcgggcggcgtacgccatggacgggttcgagcacaac
acctggcgggccgggctcgaccggctgctgctgggcgtcgcgatgagcgacgacgagcac
cgccacgtcggtcgcgggctgccggtcgacgacatcgccagcggtgagatcgagctggtc
ggccggatgagcgaggcggtcgctcggctcggcgcctgcctcggcgcgctcgacgccgcg
accgccgccgagcagtggttcgcggccctcgccgaaggtgtgcgcgacctgtgcgaggtc
gaggacgacgacgcgtggcagctgccgcagttcgagcgcgagctcgcgcgggccagggcc
agtgccgacgagagcgacgctgacaacacgggcgttccactgcgactcgccgacgtgcgt
gcgctgctgcaggcccggctggccggacggccgacgcgcgccaacttccgcaccggcacc
ctgaccgtctgcacgatggtgccgatgcggtcggtgccccaccgggtggtgtgcctggtc
gggctcgacgacggcgtcttcccgcgcaccagcggggtcaacggcgacgacgtcctcggc
cgccggccgcgggtcggcgagcgcgacctgcgtggtgaggaccgccagctgctgctcgac
gcgatcctcgcggccggcgagcggctggtggtcacctacaccggcgccgccgagcacacc
ggccaggagcggccgccggccgtgccgctcggtgagctgctcgacgcccttgaccgcacg
gccgcggcgccggtgcgtgaccgggtcgtcgtacgccatccgttgcagggcttcgacccg
cgcaaccacgtccccggcgagctggtcgggagcgagccgttcagcttcgaccgcgcctcg
ctcgccggcgcgcgggcgtcggtgcgggagcggacgccggtcccgtccttcctgtcgggc
cccttgacgacccgcccgcagcaggacgtgtccctcgccgacctcgtcgacttcgtgctc
cgccccgcccgcaccttcctgcgcggccggctcgacgtcgccaccccgttcgagcccggc
gaggtcgccgacgcgatccccgtcgacctcgacaacctggagaagtgggcgatcggcgac
cgactgctgcgcgcggtgctctcctccgaggaccccggcacgaccggcgaggcggtgatg
ctcgccgagcagctgcgcggctcgttgccccccttcggcctcggccacggcgcgctcgcc
gaggtcgtccgcgactgccaggccctgctccagcagagcgcgccgctgcgggccgccccc
gcgcgcagcgtcgacgtcgacgtcgacctcgggggcggtcgccggctcaccggcaccgtg
ccccggatccacggcaaccagctcgtcgacgtcacctactcccggcccggccccaagcag
cggatcgcgtcgtggttgcgtgtggtcgccctcagcgccagccaccccgacgagaactgg
agcagccacgcgatcgcccgcgccaagggcggaccccagcgggcgctggccgggccgctg
gaccaccgcgcactcgagtggctgggcgccgtcgtggcgctctacgacgaaggtgccgtg
cggccgctgccgatcccgctcaagaccgcgcatgcctgggccgaggcgcgggcaaaggag
ctgcgcgggatggacatcgacccggtcgaggccgcgggtcgcgcctggaggaccgacccg
ttcaacccgttcggcatcaccggcgaggacgacgacgccgtgcaccgccggatctggggg
cacgacgcgccggtgtcggtgctgatcgacgccggcctgccgtcgtacgcctggacgttg
tgggagcctctgctcgccggcgccgagaaggtgggtcccctatga
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