Nocardioides sp. QY071: QI633_25605
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Entry
QI633_25605 CDS
T10893
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nocq Nocardioides sp. QY071
Pathway
nocq03018
RNA degradation
Brite
Enzymes [BR:
nocq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QI633_25605
Messenger RNA biogenesis [BR:
nocq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QI633_25605
DNA repair and recombination proteins [BR:
nocq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QI633_25605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WGY01895
LinkDB
All DBs
Position
complement(5327418..5329538)
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AA seq
706 aa
AA seq
DB search
MDTQAPTDAAVRTRAEEHLRALVGRPDATLYDDQWAAIAALVVDRRRALVVQRTGWGKSA
VYFVATLLLREQGSGPTVIISPLLALMRNQIAAAERAGIRAVTVNSTNMEQWDEVHRAIA
AGEVDVLLVSPERLNNPGFRDEVLPRLAATCGLLVVDEAHCISDWGHDFRPDYRRIRTLL
RELPDGIPVLATTATANQRVTDDVAEQLGGDALVLRGSLDRASLRLGVVRLTTAEQRLAW
LADHLAEQPGSGIVYCLTVAATQEVADYLRSRGHQVAAYSGQTEQTERLALEQALVDGEV
KALVATSALGMGFDAALGFVVNLGAPNSPVAYYQQVGRAGRGTVDDATVVLLPAVEDRDI
WAYFASLAFPREELVRETLAVLAEEGRALSTAALEPRVDLSRNRLETMLKVLDVDGAVRR
VKGGWEATGQPWSYDAERYERVAAARQAEQQAMLDYLRSDECRMRYLRRQLDDPAVLADP
EWRCGRCDNCGGLVLSTEVSAAAVEEAADRIARPGVPIEPRKLWPTGLAAIGVSRSGRIK
QPAEEGRAIARLTDLGHGAALRGLFAVDAPDGPVPDSLARAMVTMLHDWQPRVDAIVVAG
SERKSQLTADLAGGLSRFLQVPVVGRWDVVDLSVGPDRGATNSAQRVAAVSRRCALRLDD
PAAVQDRRVLLVDDRLVTGWSVTLATEVLHAAGAAAVVPLVLGVSG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggacacccaggcccccaccgacgccgccgtccgcacccgtgcggaggagcacctccgt
gcgctggtcggccgccccgacgcgacgctgtacgacgaccagtgggccgcgatcgccgcg
ctggtcgtcgaccggcggcgcgccctcgtcgtccagcgcaccggatggggcaagtccgcg
gtctacttcgtggcgaccctcctgctgcgcgagcaggggagcgggccgacggtgatcatc
tcgccgctgctggccctgatgcgcaaccagatcgccgcggcggagcgggccgggatccgc
gcggtgacggtcaactcgaccaacatggagcagtgggacgaggtccaccgcgcgatcgcg
gcgggcgaggtcgatgtgctcctggtcagccccgagcggctcaacaacccgggcttccgt
gacgaggtgctgccccggctcgcggcgacctgcggccttctggtcgtcgacgaggcgcac
tgcatctccgactggggtcacgacttccggcccgactaccgccgcatccggaccctgttg
cgcgagcttcccgacggcatcccggtgctcgcgaccaccgccaccgccaaccagcgggtg
accgacgacgtcgcggagcagctgggaggtgacgcgctggtgctgcgcggcagcctcgac
cgggcgtccctgcgcctcggcgtggtgcgcctgaccacggccgagcaacgcctggcctgg
ctggccgaccacctcgccgagcagcccggcagcggcatcgtctactgcctgaccgtggcg
gccacccaggaggtcgccgactacctgcgctcgcgggggcaccaggtggcggcctactcc
ggccagaccgagcagaccgagcggctcgcgttggagcaggcgctggtcgacggcgaggtc
aaggcgctggtggcgaccagtgcgctcgggatgggcttcgacgctgcgctcgggttcgtg
gtcaacctcggcgcgcccaacagtcccgtggcctactaccagcaggtcggccgcgcgggc
cgtggcacggtcgacgacgcaacggtggtgctgctgccggccgtcgaggaccgcgacatc
tgggcctacttcgcctcgctcgccttcccgcgcgaggagctggtccgcgagaccctcgcg
gtgctggccgaggagggccgggcgctgagcacggccgcgctcgagccgcgcgtcgacctg
tcgcgcaaccggctcgagaccatgctcaaggtgctcgacgtcgacggtgccgtacgccgg
gtcaagggcggctgggaggcgaccgggcagccgtggtcctacgacgcggagcgctacgag
cgggtcgccgccgcgcggcaggccgagcagcaggccatgctcgactacctgcgcagcgac
gagtgccggatgcgctacctgcgtcgccagctcgacgacccggccgtgctcgccgacccg
gagtggcgctgcggccggtgtgacaactgcggcggcctcgtcctctcgaccgaggtgtcc
gccgcggcggtcgaggaggccgccgaccgcatcgcccgccccggtgtgccgatagagccc
cgcaagctgtggcccaccgggctcgccgcgatcggggtcagccggtcggggcggatcaag
cagcccgccgaggaggggcgggccatcgcgcggctcaccgacctcggccacggcgccgcg
ctgcgcggcctgttcgcggtcgacgcccccgacggtccggtgcccgactcgctggcgcgg
gcgatggtgaccatgctccacgactggcagccacgggtcgacgcgatcgtggtcgccggg
tccgagcgcaagtcccagctgaccgccgacctcgctggtggtctgtcccggttcctgcag
gtcccggtcgttggccgctgggacgtcgtcgacctctcggtcgggcccgaccggggcgcc
accaactccgcccagcgggtcgccgccgtcagccgccggtgcgcgctccggctcgacgac
ccggccgccgtgcaggaccgccgagtgctgctcgtcgacgaccggctggtcaccgggtgg
tcggtcacgctggcgacggaggtgctccacgccgcgggcgcggccgccgtcgtcccgctg
gtgctgggggtgagcggctga
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