Nocardioides sp. Arc9.136: OSR43_00475
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Entry
OSR43_00475 CDS
T10603
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OSR43_00475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocr03400
]
OSR43_00475
Enzymes [BR:
nocr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OSR43_00475
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OSR43_00475
DNA repair and recombination proteins [BR:
nocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OSR43_00475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
WKN48632
LinkDB
All DBs
Position
complement(101444..102310)
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEALALDLLGRLDGRAIVKVHVAAFSALKTFDPPLSALEGTLVDDVTRHGKFLD
LDCSGTHLVLHLARAGWVRWRDEVPTIPPKPSTKSTLAVRIVLDDASGLDVTEAGTRKSL
AMYVVRDPMDVPGIATLGPDPLVDDFTVERLGEILQREGRKQIKGVLRHQGTIAGIGNAY
SDEVLHAARMSPYKPASSIEGEELQSLFDALRATVGAAVDRSRGLAASELKGEKKSNLAV
HGRTGQPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRMSKLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtggaagcgctggccctcgacctgttgggccggctcgacgga
cgcgcgatcgtcaaggtccacgtcgcggcgttcagcgcgctgaagaccttcgacccgccg
ctcagcgccctcgaggggacgctcgtcgacgacgtcacccggcacggcaagttcctggac
ctggactgctccgggacccacctcgtgctgcacctcgcccgcgcgggctgggtgcgctgg
cgcgacgaggtgccgacgatcccgcccaagccgagcacgaagtccaccctggccgtgcgc
atcgtcctcgacgacgcgtccgggctcgacgtcaccgaggcgggcacccgcaagagcctg
gcgatgtacgtcgtgcgggacccgatggacgtccccggcatcgccacgctgggccccgac
ccgctcgtcgacgacttcaccgtcgagcggctcggcgagatcctgcagcgcgagggccgc
aagcagatcaagggcgtgctgcgccaccagggaacgatcgccggcatcggcaacgcctac
tccgacgaggtcctgcacgcggcccggatgtcgccgtacaagccggcgagctcgatcgag
ggcgaggagctgcagagcctcttcgacgcgctgcgcgccaccgtcggcgccgcggtcgac
cgctcgcgcgggctggcggccagcgagctcaagggcgagaagaagtcgaacctcgccgtc
cacggccgcaccggacagccgtgcccggtgtgcggcgacaccgtccgcgaggtctccttc
gccgactccagcctgcagtactgcccgacctgccagaccggcggcaagccgctggccgac
cggcggatgtcgaagctgctcaagtag
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