Nocardioides sp. Arc9.136: OSR43_03485
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Entry
OSR43_03485 CDS
T10603
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nocr Nocardioides sp. Arc9.136
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocr03032
]
OSR43_03485
03400 DNA repair and recombination proteins [BR:
nocr03400
]
OSR43_03485
Enzymes [BR:
nocr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OSR43_03485
DNA replication proteins [BR:
nocr03032
]
Prokaryotic type
DNA Topoisomerases
OSR43_03485
DNA repair and recombination proteins [BR:
nocr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OSR43_03485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WKN49201
LinkDB
All DBs
Position
741916..742920
Genome browser
AA seq
334 aa
AA seq
DB search
MPRLRRTSPDQPGWTRRRAGKGWVYLDQHGERLPEEAVGRIRDLVIPPAWKDVWVTPYDN
GHLQAVGTDDAGRRQYLYHQAWRERRDAEKFARMEEFGAALTRARELVVADLGREGMPLE
RACAAAVRLLDLGYFRIGNDVYADTNGSFGLTTLERRHVRRRQDRLVFAFVGKSGVQHRI
EIDDAIVIETIESMRRRRGGPGRLLSYKEGRSWRDVLPALVNEYVRASTGLEATAKDFRT
WHATVLAAAALAATPEHGESAASRKRAVSGAMKEVSSFLGNTPTLARSSYVDPRVIEAYE
GGRTIHEATDKEYDSPDERQAGLERATLDLLRGE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtctgcgccgcacgtcgccggaccagcccggctggacgcgtcggcgcgccggc
aagggctgggtctacctcgaccagcacggcgagcggctgcccgaggaggcggtcgggcgg
atccgcgacctggtgatccccccggcgtggaaggacgtgtgggtcacgccgtacgacaac
ggccacctgcaggcggtcgggaccgacgacgccggccggcggcagtacctctaccaccag
gcctggcgcgagcggcgggacgcggagaagttcgcgcggatggaggagttcggcgccgcg
ctcacccgcgcccgcgagctggtggtcgccgacctgggtcgcgaggggatgccgctggag
cgggcgtgcgcggccgcggtgcggctgctcgacctcggctacttccggatcggcaacgac
gtctacgccgacaccaacggcagcttcgggctcaccaccctcgagcgccggcacgtgcgg
cgccggcaggaccggctggtcttcgcgttcgtcgggaagtccggcgtccagcaccgcatc
gagatcgacgacgcgatcgtgatcgagacgatcgagtcgatgcgccgcaggcgtggcggg
ccggggcggctgctgtcgtacaaggagggccgctcctggcgcgacgtcctccccgcgctc
gtcaacgagtacgtccgggcctcgaccgggctcgaggccaccgccaaggacttccgcacc
tggcacgcgacggtgctggccgccgccgccctcgccgccacccccgagcacggggagagc
gcggcctcgcggaagcgggcggtctccggtgcgatgaaggaggtgtcgtcgttcctcggc
aacacccccacgctcgcccggtcctcctacgtcgacccgcgggtgatcgaggcctacgag
ggcgggcggaccatccacgaggccaccgacaaggagtacgactcgcccgacgagcgccag
gccggcctcgagcgggccaccctcgacctgctccggggagagtga
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