Nocardioides sp. Arc9.136: OSR43_05605
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Entry
OSR43_05605 CDS
T10603
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OSR43_05605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocr03400
]
OSR43_05605
DNA repair and recombination proteins [BR:
nocr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
OSR43_05605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
DUF7304
CIS_TMP
Motif
Other DBs
NCBI-ProteinID:
WKN49606
LinkDB
All DBs
Position
complement(1174330..1175316)
Genome browser
AA seq
328 aa
AA seq
DB search
MRAIWKGAVSFGLVSVPVKLYAATESHDVSFRQVHAKDGGRIKYQRVCSIDGEEVAYSDI
AKGYETEDGEMVILDEDDLAELPSTSSREIAVEKFVPSDQIDPMLFEKSYYLEPEKSGAK
PYALLRQALLEADRMAVVTVALRQRTTVAVLRVRDDVIVLQTMMWPDEVREPDFSVETGE
VKAAEVKMARMLVETLAGDFDPAEFEDDYAEAVEALVKTKIEGGEVKRTPTSTKSSGEVV
DLLAALQRSVDAAKTARGEAAPRASDEDQADSDSDSADDGAEEKPAKKSSSSSAKKTPAK
KAPAKKAAAKKAPAKKSTTKKAAAKKAS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcgatctggaagggtgcggtgtccttcggcctggtcagcgtgccggtcaagctg
tacgccgcgaccgagtcgcacgacgtgtccttccggcaggtgcacgccaaggacggcggg
cggatcaagtaccagcgggtctgctcgatcgacggcgaggaggtggcctactccgacatc
gccaagggctacgagaccgaggacggcgagatggtcatcctcgacgaggacgacctcgcc
gagctgccctcgacctcctcgcgcgagatcgcggtcgagaagttcgtgccctcggaccag
atcgacccgatgctgttcgagaagagctactacctcgagccggagaagtccggggccaag
ccctacgcgctgctgcgccaggcgctcctcgaggccgaccggatggccgtcgtcaccgtc
gcgctgcgccagcgcaccaccgtcgcggtgctccgcgtgcgcgacgacgtgatcgtgctg
cagacgatgatgtggcccgacgaggtccgcgagcccgacttcagcgtcgagaccggtgag
gtcaaggccgccgaggtgaagatggcccggatgctcgtcgagaccctcgccggcgacttc
gaccccgcggagttcgaggacgactacgccgaggccgtcgaggccctggtgaagaccaag
atcgagggcggcgaggtcaagcggacccccacctccaccaagtcctccggcgaggtcgtc
gacctcctcgccgcgctgcagcgctccgtcgacgccgcgaagaccgcccgtggcgaggca
gcaccgcgggcctccgacgaggaccaggccgactccgactccgactccgccgacgacggg
gccgaggagaagccggccaagaagtcctcgtcgtcgtccgcaaagaagaccccggcgaag
aaggctcccgccaagaaggccgctgcgaagaaggccccggccaagaagagcacgaccaag
aaggcggcggcgaagaaggcgagctga
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