Nocardioides sp. Arc9.136: OSR43_07095
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Entry
OSR43_07095 CDS
T10603
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OSR43_07095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nocr03000
]
OSR43_07095
03400 DNA repair and recombination proteins [BR:
nocr03400
]
OSR43_07095
Enzymes [BR:
nocr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OSR43_07095
Transcription factors [BR:
nocr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OSR43_07095
DNA repair and recombination proteins [BR:
nocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OSR43_07095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
OM14_C
Motif
Other DBs
NCBI-ProteinID:
WKN49884
LinkDB
All DBs
Position
1465305..1466831
Genome browser
AA seq
508 aa
AA seq
DB search
MGAVTTTDGDLRLDPESCYRAVKSRDRRFDGVFWTAVRTTGIYCRPSCPARTPAYGNVTF
HPSAAAAQAAGYRACKRCLPDATPGSPDWDVAATVAGRAMRLLADGVVDREGVEGLARRV
GYTPRHLSRILLAELGAGPLGLARARRAQTARVLIETTDLSYADVAFAAGFTSVRQFNDT
VREVYAASPTQLRGRRDRRGGDGTVTMRLAVRTPFAGRALLDFLAYHLVPGVEVAGDGWY
ARTLDLPHGPGVVRLDLADERDAGRTAFVAATLTLHDLRDTTAAVERARRLLDADCDPVA
VDDHFAGDPVVGPLVRACPGLRVPGQVDGDETALRTVVGQQVSVAGARTVLGRLVAEHGR
PVATDVPGLTHLFPDTATLAAVDPATLPMPRARGRALVGLAAALAAGDVALDRGAERDDV
RRRLLVLPGIGPWTADYVAMRALAHPDVFLPTDVGVRNALRGLGHDDVSVTRLVAGADDW
RPWRSYALLHLWNTLMPPTAPPDRTEAT
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgtgacgacgaccgacggcgacctccggctggaccccgagtcctgctaccgc
gcggtgaagtcgcgggaccgtcgcttcgacggcgtcttctggaccgccgtgcggacgacc
gggatctactgccggcccagctgcccggcgcgcacgccggcgtacggcaacgtcaccttc
caccccagcgccgcggcggcccaagcggccggctaccgggcctgcaagcggtgcctgccg
gacgcgaccccgggcagcccggactgggacgtcgcggcgacggtggccggccgggcgatg
cggctgctcgcggacggcgtggtcgaccgggagggggtcgaggggctcgcccgccgggtg
ggctacaccccgcgccacctctcccggatcctcctggccgagctcggcgccggccccctg
ggcctggcgcgcgcccgtcgcgcccagaccgcccgcgtgctcatcgagaccacggacctg
tcctacgccgacgtggcgttcgccgccgggttcacgagcgtccggcagttcaacgacacc
gtccgcgaggtgtacgccgcgtccccgacccagctgcgcggtcgtcgcgaccggcgcggc
ggcgacggcaccgtgacgatgcggctcgccgtccgcacccccttcgcgggccgtgcgctg
ctggacttcctcgcctaccacctggtcccgggggtggaggtcgccggcgacggctggtac
gcccggaccctcgacctgccgcacgggccgggcgtcgtgcgcctcgacctcgccgacgag
cgggacgccgggcggacggcgttcgtcgccgcgacgctcaccctgcacgacctccgcgac
acgaccgccgccgtcgagcgcgcccggcgcctgctcgacgccgactgcgaccccgtggcc
gtcgacgaccacttcgccggcgacccggtcgtcgggccgctcgtgcgtgcctgcccgggg
ttgcgcgtgcctggccaggtcgacggtgacgagaccgccctgcgcaccgtcgtcgggcag
caggtcagcgtcgcgggcgcccgcacggtgctcgggcgcctggtcgccgagcacggccgc
ccggtggccaccgacgtcccgggtctcacccacctgttcccggacacggccacgctggcc
gcggtggacccggcgaccctgccgatgccgcgggcgcgtggtcgggcgctcgtcggcctc
gccgcggcgctcgcggccggcgacgtcgcgctcgaccggggcgcggagcgcgacgacgtg
cgccgccggctcctcgtcctgcccggcatcgggccctggacggccgactacgtcgcgatg
cgcgccctggcacaccccgacgtcttcctgccgaccgacgtcggcgtgcgcaacgccctg
cgcgggctcggccacgacgacgtctccgtcaccaggctcgtcgccggggcggacgactgg
cggccctggcgctcctacgcgctgctgcacctgtggaacaccctgatgccacccaccgca
ccaccggacaggacggaggccacctga
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