KEGG   Nocardioides sp. Arc9.136: OSR43_07195
Entry
OSR43_07195       CDS       T10603                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
nocr  Nocardioides sp. Arc9.136
Pathway
nocr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nocr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    OSR43_07195 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nocr03019]
    OSR43_07195 (rnc)
   03009 Ribosome biogenesis [BR:nocr03009]
    OSR43_07195 (rnc)
   03036 Chromosome and associated proteins [BR:nocr03036]
    OSR43_07195 (rnc)
Enzymes [BR:nocr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     OSR43_07195 (rnc)
Messenger RNA biogenesis [BR:nocr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     OSR43_07195 (rnc)
Ribosome biogenesis [BR:nocr03009]
 Eukaryotic type
  90S particles
   RNase
    OSR43_07195 (rnc)
 Prokaryotic type
  rRNA processing factors
   OSR43_07195 (rnc)
Chromosome and associated proteins [BR:nocr03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     OSR43_07195 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: WKN49902
LinkDB
Position
1484155..1484979
AA seq 274 aa
MRPVRRSRRPSSGHLRTGPLTNYSELRAALGDPELDPELLERALTHRSYAYENGGLPTNE
RLEFLGDSVLGVVVTETLYTTHPDLSEGRLAKLRAAVVNARALAEVGRAIGLGDHVKLGR
GEESTGGRGKASILSDTVEAVIGAVHLSGGGFETSARVVHLLFDPLIEAASAMGAGLDWK
TSLQELAAEHALGVPEYVIEDEGPDHQKTFTAQVRVGDKLYGNGVGRSKKEAEQAAAETA
YGEIATALGVTDPAADAATSTATSTATSASQHSA
NT seq 825 nt   +upstreamnt  +downstreamnt
gtgcggccagtacggcgctcgcgccgaccgtcgtcaggtcatctgagaaccggtccactg
accaactacagcgagctgcgcgcggcgctcggggatccggagctggaccccgagctgctg
gagcgtgcgctcacgcaccgttcctacgcgtacgagaacggcggcctgccgaccaacgag
cgcctggagttcctgggtgactcggtgctcggcgtcgtcgtgaccgagacgctctacacg
acccaccccgacctctccgagggtcggctggccaagctccgcgccgcggtcgtcaacgcc
cgcgcgctggccgaggtgggtcgggccatcggcctgggcgaccacgtgaagctcggtcgt
ggcgaggagtcgacgggcggtcggggcaaggcctcgatcctctccgacaccgtcgaggcg
gtcatcggggccgtccacctctccggtggcggcttcgagacctccgcccgcgtcgtccac
ctcctcttcgacccgctcatcgaggccgcctcggccatgggcgcgggcctggactggaag
acctcgctgcaggagctcgccgccgagcacgccctcggggtccccgagtacgtcatcgag
gacgagggccccgaccaccagaagaccttcaccgcgcaggtccgggtcggcgacaagctc
tacggcaacggcgtgggccgctccaagaaggaggccgagcaggccgccgcggagacggcg
tacggcgagatcgccaccgccctgggcgtcacggacccggcggccgacgccgccacgagc
accgccacgagcaccgccaccagcgcctcccagcactccgcctga

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