Nocardioides sp. Arc9.136: OSR43_07200
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Entry
OSR43_07200 CDS
T10603
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OSR43_07200 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocr03400
]
OSR43_07200 (mutM)
Enzymes [BR:
nocr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OSR43_07200 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OSR43_07200 (mutM)
DNA repair and recombination proteins [BR:
nocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OSR43_07200 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Auto_anti-p27
DZR
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
WKN49903
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All DBs
Position
1484983..1485882
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AA seq
299 aa
AA seq
DB search
MPELPEVEVVRAGLERHVLGATITRVDVLHPRPVRRDPRGPEGFAQALAGRRIVAARRRG
KYLWLPLDDGDALMAHLGMSGQLLVQPPDAPAERHLRVRLALDGADEGRELRFVDQRMFG
GLSVSAGGAGLPPEIAHIARDPLDEQFDLDDVVRRVRRRTSGVKRLLLDQNLVSGVGNIY
ADEALWRARLHGERPGDRLTGPQVRELLGHVRDVMTDALAQGGTSFDALYVNVNGESGYF
DRSLHAYGREGEPCDRCGTPIRRVAFMNRSSYFCPRCQPAPRRRRPVPAGAPPVVPVPD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctgcccgaggtcgaggtcgtccgcgccggcctcgagcggcacgtgctcggc
gcgacgatcacccgcgtcgacgtcctccacccgcgaccggtgcgccgcgacccccgcggg
ccggagggcttcgcccaggcgctggcggggcgccgcatcgtcgccgcccgccggcgcggg
aagtacctctggctgccgctcgacgacggcgacgcgctgatggcgcacctcggcatgagc
gggcagctgctggtgcagccgcccgacgcgccggccgagcggcacctgcgggtgcggctg
gcgctcgacggcgcggacgaggggcgcgagctgcggttcgtcgaccagcggatgttcggc
ggcctctcggtctcggccggcggcgccgggctgccgcccgagatcgcccacatcgcccgc
gacccgctcgacgagcagttcgacctcgacgacgtcgtacgtcgcgtgcggcgccggacc
tcgggcgtcaagcggctgctgctggaccagaacctcgtctcgggcgtcggcaacatctac
gccgacgaggcgctgtggcgcgcgcgcctgcacggcgagcgcccgggggaccggctgacg
ggtccgcaggtgcgcgagctcctcggccacgtgcgcgacgtgatgaccgacgcgctcgcc
cagggcgggacgtcgttcgacgcgctgtacgtcaacgtcaacggcgagtccggctacttc
gaccgctcgctgcacgcctacggccgcgagggggagccgtgcgaccggtgcgggacgccc
atccgccgggtggcgttcatgaaccgctcgtcgtacttctgcccgcgctgccagccggcg
ccgcgccggcgacgcccggtgccggcgggtgccccgccggtggtgcccgtcccggattga
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