Nocardioides sp. Arc9.136: OSR43_07565
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Entry
OSR43_07565 CDS
T10603
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nocr Nocardioides sp. Arc9.136
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nocr03016
]
OSR43_07565 (truB)
Enzymes [BR:
nocr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OSR43_07565 (truB)
Transfer RNA biogenesis [BR:
nocr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OSR43_07565 (truB)
Prokaryotic type
OSR43_07565 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WKN49970
LinkDB
All DBs
Position
1561918..1562847
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AA seq
309 aa
AA seq
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MTAPAARPAVRPGLVVVDKPGGMTSHDVVSRVRRLVGTRKVGHAGTLDPMATGVLVLGVD
RATRLLGHLMLTDKGYDATVRLGVATTTDDAEGEVLAATPAGHLDEDAVRAVLAEFVGEL
QQVPTAVSAIKVDGKRAYQRVRDGEQVELQARAVTVHELVVHEVRRGAHRPGRGDAVEVV
DVDISLRCSSGTYVRAIARDAGARLGVGGHLTALRRTAVGPYGLDVARTLEELADEVAAG
HGGVLPIADAARAAFPARDLDDRAAADVRVGRSLDLELDATTAVFAPSGEFLALYEPRGG
LARPVAVFV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgacggctccggccgcccgccctgccgtgcgccccgggctcgtcgtggtcgacaagccc
ggcgggatgacctcccacgacgtcgtctcccgcgtccgtcggctcgtcggcacccgcaag
gtgggccacgccggcacgctcgacccgatggccaccggcgtgctggtgctcggcgtcgac
cgggcgacccgcctgctgggtcacctgatgctcaccgacaaggggtacgacgccacggtg
cggctcggcgtcgccacgacgaccgacgacgccgagggcgaggtgctcgcggcgacgccg
gccggccacctggacgaggacgccgtccgcgcggtgctcgccgagttcgtcggcgagctg
cagcaggtcccgaccgccgtgtcggcgatcaaggtggacggcaagcgcgcctaccagcgg
gtccgcgacggcgagcaggtcgagctccaggcccgcgccgtgaccgtccacgagctcgtc
gtgcacgaggtgcgtcgcggtgcgcacaggcctgggcgcggcgacgcggtcgaggtggtc
gacgtcgacatcagcctgcgctgctcgagcggcacctacgtccgcgcgatcgcccgcgac
gccggcgcccggctcggcgtcggcgggcacctgacggcgctgcggcgcaccgccgtcggc
ccctacgggctcgacgtcgcccgcacgctggaggagctcgccgacgaggtcgccgccggc
cacgggggagtgctgccgatcgccgacgcggcgcgggcggcgttcccggcccgcgacctc
gacgaccgcgcggccgccgacgtgcgggtcggccgcagcctcgacctcgagctcgacgcc
acgaccgcggtcttcgccccgtcgggggagttcctcgcgctctacgagccgcgcggcggt
ctcgcccgcccggttgccgtcttcgtctga
DBGET
integrated database retrieval system
