Nocardioides sp. Arc9.136: OSR43_08445
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Entry
OSR43_08445 CDS
T10603
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr03030
DNA replication
nocr03410
Base excision repair
nocr03420
Nucleotide excision repair
nocr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OSR43_08445 (polA)
03410 Base excision repair
OSR43_08445 (polA)
03420 Nucleotide excision repair
OSR43_08445 (polA)
03440 Homologous recombination
OSR43_08445 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocr03032
]
OSR43_08445 (polA)
03400 DNA repair and recombination proteins [BR:
nocr03400
]
OSR43_08445 (polA)
Enzymes [BR:
nocr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OSR43_08445 (polA)
DNA replication proteins [BR:
nocr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OSR43_08445 (polA)
DNA repair and recombination proteins [BR:
nocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OSR43_08445 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OSR43_08445 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WKN50140
LinkDB
All DBs
Position
1734227..1736920
Genome browser
AA seq
897 aa
AA seq
DB search
MPDAATDAVTPRLLLLDGHSLAYRAFFALPVENFSTTTGQHTNAVYGFTSMLINVLRDEQ
PTHLGVAFDVSRQTFRMEEYSEYKAKRAKTPSEFGSQLPLIEEVLGALRVPFLKKDGYEA
DDIIATLTTQALDAGMEVLILTGDRDALQLVTDRSTVLYPMRGVSDLARMTPDAVEAKYG
VPPYRYPEIAAIVGETSDNLPGVPGVGVGFAAKWINTYDGLDNVITHADKITGKKGESLR
AHLGDVIRNRRLNALVRDLDLELGPQDLLIRPWDRQEVHTLFDGLEFRVLRDRLFETLSS
EEEIDDSGFDVAMSRLGAGELAAWLAEHASGEDRVGVHVAGRWGAGTGDVDALALATVEG
AAAYVTAETMDPADEEALRSWLADPARRKVLHDAKGPILALDAWGMPLAGLTRDTALSAY
LARPDQRSYDLADLTVRYLKRELRTGGADDGQLSLDGITDETAGEVEMLHARAVLDLAAA
LDEELADRGGTRLLEDIELPLVDLLATMERTGIAVDIEHLEELERHFAGEVKLAAEDAFA
VIGKEINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDADALQALYVKTEHPFLLHLLRHR
DVARLRQTIEGLLKTVAPDGRIHTTFNQTIAATGRLSSTDPNLQNIPIRTEEGRRIREAF
VVGPGHESLMTADYSQVEMRIMAHLSEDALLIDAFRSGHDFHSVTAARVFDVPAEEVGPE
QRAKIKAMNYGLAYGLSAYGLSQQLTIEPAEARVLMDEYFETFGGIRDYLGGVVDEARRT
GYTETIYGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIKIAMLNVDRAVREAGL
RSRMLLQVHDELVLEVAEGEREALEELVRREMAGAAELAVPLDVSVGTGRSWHEAAH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccgcgactgatgccgtgaccccgcgactgctcctgctcgacggccactcc
ctggcctaccgggcgttcttcgcgctgccggtggagaacttctccacgaccacggggcag
cacaccaatgcggtgtacggcttcacctcgatgctcatcaacgtgctgcgcgacgagcag
ccgacccacctcggcgtcgccttcgacgtctcccgccagaccttccgcatggaggagtac
tccgagtacaaggccaagcgggccaagacgccctcggagttcggcagccagctgccgctg
atcgaggaagtcctcggcgccctgcgggtcccgttcctgaagaaggacgggtacgaggcc
gacgacatcatcgcgacgctgaccacccaggcgctcgacgcggggatggaggtgctgatc
ctcaccggcgaccgcgacgcgctgcagctggtcaccgaccgctccaccgtgctctacccc
atgcggggcgtctcggacctggcccggatgacccccgacgcggtcgaggcgaagtacggc
gtgccgccgtaccgctaccccgagatcgccgcgatcgtgggggagacctccgacaacctc
ccgggcgtgcccggtgtgggcgtcggcttcgcggccaagtggatcaacacctacgacggc
ctcgacaacgtcatcacccacgccgacaagatcaccggcaagaagggggagtcgctgcgc
gcgcacctcggcgacgtgatccgcaaccgccggctcaacgcgctcgtgcgcgacctcgac
ctcgagctcggcccgcaggacctcctcatccggccgtgggaccggcaggaggtccacacc
ctcttcgacgggctggagttccgcgtcctgcgcgaccggctcttcgagacgctgagctcg
gaggaggagatcgacgactccggcttcgacgtggcgatgagccggctgggcgccggcgag
ctcgccgcctggctggccgagcacgcctccggcgaggaccgcgtcggcgtgcacgtcgcc
ggccgctggggcgccgggacgggggacgtcgacgcgctggcgctggccacggtcgagggg
gcggcggcgtacgtcaccgccgagacgatggaccccgccgacgaggaggcgctgcgctcc
tggctggccgaccctgcccggcgcaaggtcctccacgacgcgaagggtccgatcctcgcg
ctcgacgcgtggggcatgccgctggccggcctcacccgcgacaccgcgctctcggcgtac
ctcgcccggcccgaccagcgctcctacgacctcgccgacctcaccgtccgctacctcaag
cgcgagctgcgcaccggcggcgccgacgacggccagctgagcctcgacggcatcaccgac
gagacggccggggaggtcgagatgctgcacgcccgtgccgtgctcgacctcgccgccgcg
ctcgacgaggagctggccgaccgcggcggcacccggctgctcgaggacatcgagctgccg
ctcgtcgacctgctggcgaccatggagcgcaccggcatcgcggtggacatcgagcacctg
gaggagctcgagcggcacttcgccggcgaggtgaagctcgcggccgaggacgccttcgcg
gtcatcggcaaggagatcaacctcgggtcgcccaagcagctgcaggtcgtgctcttcgac
gagctcgacatgcccaagaccaagcggaccaagaccggctacaccaccgacgcggacgcc
ctgcaggcgctgtacgtcaagaccgagcacccgttcctgctgcacctgctgcggcaccgc
gacgtcgcccggctccgccagacgatcgaggggctgctcaagacggtggccccggacggc
cgcatccacacgacgttcaaccagaccatcgccgcgaccggccggctctcgagcaccgac
ccgaacctgcagaacatcccgatccgcaccgaggagggccgccggatccgcgaggcgttc
gtcgtcggcccgggccacgagtcgctgatgacggccgactacagccaggtcgagatgcgg
atcatggcgcacctctccgaggacgccctgctcatcgacgccttccgctccggccacgac
ttccactccgtgaccgccgcccgggtcttcgacgtgcccgccgaggaggtggggcctgag
cagcgcgcgaagatcaaggcgatgaactacggcctggcctacgggctctcggcgtacggc
ctgagccagcagctgaccatcgagcccgccgaggcccgggtgctgatggacgagtacttc
gagaccttcggcgggatccgcgactacctcggcggggtggtcgacgaggcccggcgcacc
ggttacaccgagacgatctacggccgtcggcgctacctgcccgacctgaccagtgacaac
cgccagcggcgggagatggccgagcggatggcgctgaacgcccccatccagggctctgct
gcggaccttatcaagatcgcgatgctgaacgtcgaccgcgccgtccgcgaggccgggctg
cgctcgcggatgctgttgcaggtccacgacgagctcgtcctcgaggtcgccgagggggag
cgcgaggcgctggaggagctggtgcgtcgcgagatggccggcgccgccgagctcgcggtg
ccgctcgacgtgtcggtgggcaccggccgcagctggcacgaggccgcgcactga
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