Nocardioides sp. Arc9.136: OSR43_08525
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Entry
OSR43_08525 CDS
T10603
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OSR43_08525 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nocr03011
]
OSR43_08525 (rpsA)
Ribosome [BR:
nocr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OSR43_08525 (rpsA)
Bacteria
OSR43_08525 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
WKN50156
LinkDB
All DBs
Position
1759079..1760551
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AA seq
490 aa
AA seq
DB search
MTSTISTLPDYDAPQVAVNDIGSEEDFLAAIDATIKYFNDGDIVDGTIVKVDRDEVLLDI
GYKTEGVIPSRELSIKHDVDPSEVVEVGDKVEALVLQKEDKEGRLILSKKRAQYERAWGT
IEQVKEEDGVVEGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGQTLEAKIIE
LDKNRNNVVLSRRAWLEQTQSEVRHGFLTQLQKGQIRKGVVSSIVNFGAFVDLGGVDGLV
HVSELSWKHIDHPSEVVAVGDEVTVEVLDVDMDRERVSLSLKATQEDPWQHFARTHQIGQ
IVPGKVTKLVPFGSFVRVEEGIEGLVHISELAERHVEIPEQVVQVNDDVMVKIIDIDLER
RRISLSLKQANETATAADVEEFDPTLYGMTATYDEQGNYVYPEGFDPETGEWLEGFDEQR
ATWEEQYAKAHARWEAHVKQQQEAAKAEVEAGEATSYSSGGTDDTASTEGGSLASDEALQ
ALREKLTGGQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaccatctccactcttccggactacgacgcgcctcaggtcgcggtcaacgac
atcgggtccgaagaggacttcctcgccgcgatcgacgcgaccatcaagtacttcaacgac
ggtgacatcgtcgacggcaccatcgtcaaggtggaccgcgacgaggtcctgctcgacatc
ggctacaagaccgagggcgtcatcccctcgcgcgagctgtcgatcaagcacgacgtcgac
ccctccgaggtcgtcgaggtcggcgacaaggtcgaggccctcgtcctccagaaggaggac
aaggaaggccgcctgatcctgtccaagaagcgcgcccagtacgagcgcgcctggggcacc
atcgagcaggtcaaggaggaggacggcgtcgtcgagggcaccgtcatcgaggtcgtcaag
ggcggcctgatcctggacatcggcctgcgcggcttcctgcccgcctcgctggtggagatg
cgtcgcgtccgcgacctgcagccctacgtgggccagaccctcgaggccaagatcatcgag
ctcgacaagaaccgcaacaacgtggtcctgtcgcgccgtgcctggctcgagcagacccag
tccgaggtccgccacggcttcctgacccagctgcagaagggccagatccgcaagggcgtc
gtctcctcgatcgtcaacttcggtgcgttcgtggacctcggcggcgtcgacggcctcgtc
cacgtctccgagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgccgtgggc
gacgaggtcacagtcgaggtcctcgacgtggacatggaccgcgagcgtgtctccctgtcg
ctgaaggcgacgcaggaggacccgtggcagcacttcgcccgcacccaccagatcggccag
atcgtgccgggcaaggtcaccaagctggtgcccttcggctcgttcgtccgcgtcgaggag
ggcatcgagggcctggtgcacatctccgagctggccgagcgccacgtggagatccccgag
caggtcgtccaggtcaacgacgacgtcatggtcaagatcatcgacatcgacctcgagcgt
cgccggatctcgctgtcgctcaagcaggccaacgagaccgccacggccgccgacgtcgag
gagttcgacccgacgctgtacggcatgaccgcgacgtacgacgagcagggcaactacgtc
taccccgagggcttcgaccccgagaccggcgagtggctcgagggcttcgacgagcagcgc
gcgacctgggaggagcagtacgccaaggcgcacgcccgctgggaggcccacgtcaagcag
cagcaggaggccgccaaggccgaggtcgaggccggcgaggccacctcgtactccagcggt
ggcaccgacgacaccgcctccaccgagggcggctcgctcgcctcggacgaggcgctgcag
gcgctccgcgagaagctgaccggcggtcagtga
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