Nocardioides sp. Arc9.136: OSR43_09820
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Entry
OSR43_09820 CDS
T10603
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
nocr Nocardioides sp. Arc9.136
Pathway
nocr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OSR43_09820 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocr03400
]
OSR43_09820 (uvrA)
DNA repair and recombination proteins [BR:
nocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OSR43_09820 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OSR43_09820 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
AAA_21
AAA_16
AAA_22
DnaJ_CXXCXGXG
NACHT
nSTAND3
ATPase
Viral_helicase1
NB-ARC
DUF3090
Septin
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
WKN50408
LinkDB
All DBs
Position
2015967..2019038
Genome browser
AA seq
1023 aa
AA seq
DB search
MADQLIIRGAREHNLKDVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSKNPRSTVGTITEVYDYLRLLYARAGRPH
CPTCGAPIERQTPQQIVDRVLALEEGRRFQVLAPVIRARKGEYVELFRQLQTQGFSRARV
DGETHGLDDVPKLDKQKKHTIEVVVDRLAVKESSKRRLTDSVETALNLSGGLVLLDFVDL
DAKDPGREMRFSEKMACPNDHPIDVDELEPRSFSFNSPFGACPKCHGIGTRMEVDPELVV
PDDTATLGEGAIQPWSQAHVADYFLRLMGALGKEVGFDLNTPWRDLTPKAQKSLLDGHST
KVHVVTRNRYGRERAYYAEFEGVRTYVERRHREAETDTSRERFEGFMREVPCPACGGSRL
KPVSMAVTLGSRDGGGKNIAEVCALPINESAEFLRDLDLSTRERQIAEQVLKEIQERLRF
LLDVGLDYLSLDRPSGSLSGGEAQRIRLATQIGAGLVGVLYVLDEPSIGLHQRDNQRLIE
TLIRLKDLGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGQVVHTGTVQDLYDHPDSMTG
QYLSGRREIPVPAVRRPRTVGRELTVVGAREHNLRDVDVTFPLGMFVAVTGVSGSGKSTL
VNDILYTSLAKHLYRARTVPGRHRKITGLEHIDKVIHVDQSPIGRTPRSNPATYTGVFDH
VRKLFAQTPEAKMRGYLQGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTIAEVLDMPIEEAVDFFAAVPAINRHLKTLVEVGLGYVRLGQPATTL
SGGEAQRVKLAAELQKRSAGRTLYVLDEPTTGLHFEDIRKLLLVLGRLVDQGNSVLVIEH
NLDVIKTADWVVDMGPEGGSRGGTVVAEGTPEQVAAVPESHTGRYLAPLLEGKEAEQPRG
KAPASSAPLSRAEAAAKAKADATLARAEAKKAARKAAKAPAKKAAAAKAPAKAAGGKAAA
GGA
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaccagctgatcatccggggcgcccgggagcacaacctcaaggacgtctcgctg
gacctcccgcgcgactccctgatcgtgttcaccggtctctcgggctccggcaagtcctcg
ctggcgttcgacaccatcttcgccgagggccagcgccggtacgtcgagtcgctctcggcg
tacgcccggcagttcctcgggcagatggacaagcccgacgtcgacttcatcgagggcctc
tcgcccgcggtctccatcgaccagaagtcgacctcgaagaacccgcgctcgaccgtcggc
acgatcaccgaggtctacgactacctccggctgctctacgcgcgggcgggacggccgcac
tgcccgacctgcggggccccgatcgagcggcagaccccgcagcagatcgtcgaccgcgtg
ctggccctcgaggagggccggcggttccaggtgctcgcgccggtcatccgtgcccgcaag
ggcgagtacgtcgagctcttccgccagctgcagacccaggggttctcccgcgcccgggtc
gacggtgagacccacggcctggacgacgtcccgaagctggacaagcagaagaagcacacc
atcgaggtcgtcgtcgaccggctcgcggtcaaggagtcctccaagcgacgcctgaccgac
tcggtcgagaccgcgctcaacctgtccggcgggctggtgctcctcgacttcgtggacctc
gacgccaaggacccgggccgcgagatgcggttcagcgagaagatggcgtgccccaacgac
caccccatcgacgtcgacgagctcgagccgcgctcgttctcgttcaactcgccgttcggc
gcgtgccccaagtgccacggcatcggcacccggatggaggtcgaccccgagctggtcgtc
ccggacgacaccgccaccctgggcgagggcgcgatccagccctggagccaggcgcacgtc
gccgactacttcctccggctgatgggtgcgctcggcaaggaggtcggcttcgacctcaac
acgccgtggcgcgacctgacgcccaaggcgcagaagtcgctgctcgacgggcactcgacc
aaggtccacgtcgtcacccgcaaccggtacggccgcgagcgcgcctactacgcggagttc
gagggcgtgcggacctacgtcgagcggcgccaccgcgaggccgagaccgacacgagccgg
gagcgcttcgagggcttcatgcgcgaggtgccgtgccccgcgtgcggcggcagccggctc
aagccggtctccatggcggtcacgctcgggtcgcgcgacggcggcggcaagaacatcgcc
gaggtctgcgcgctgccgatcaacgagtccgcggagttcctccgcgacctcgacctgtcg
acccgcgagcggcagatcgccgagcaggtgctcaaggagatccaggagcggctgcggttc
ctcctcgacgtcgggctcgactacctctcgctggaccggccctcgggctcgctgtcgggc
ggcgaggcgcagcggatccggctcgccacccagatcggtgccgggctggtcggggtgctc
tacgtcctggacgagccgtcgatcggcctgcaccagcgcgacaaccagcgcctgatcgag
accctgatccggctcaaggacctgggcaacaccctcatcgtcgtcgagcacgacgaggac
accatcaaggtggccgactgggtcgtcgacatcggcccgggggccggcgagcacggcggc
caggtcgtccacaccggcaccgtccaggacctctacgaccacccggactcgatgaccggg
cagtacctctccggtcggcgcgagatcccggtccccgccgtccgccgcccgcggaccgtg
ggccgcgagctcaccgtcgtcggtgcccgcgagcacaacctgcgcgacgtcgacgtgacg
ttcccgctcggcatgttcgtggcggtcaccggcgtctccgggtcgggcaagtcgacgctg
gtcaacgacatcctctacacgtcgctggccaagcacctgtaccgcgcccggaccgtcccg
ggccggcaccgcaagatcaccgggctcgagcacatcgacaaggtgatccacgtcgaccag
tcgccgatcggtcgcacgccgcggtccaacccggcgacgtacaccggcgtcttcgaccac
gtccgcaagctgttcgcgcagacccccgaggcgaagatgcgcggctacctgcagggccgg
ttctccttcaacgtcaagggtggccgctgcgaggcgtgcgccggcgacggcacgatcaag
atcgagatgaacttcctcccggacgtctacgtcccgtgcgaggtctgccacggcgcccgg
tacaaccgcgagaccctcgaggtgcactacaagggcaagaccatcgccgaggtcctcgac
atgccgatcgaggaggccgtcgacttcttcgccgcggtgccggccatcaaccggcacctc
aagacgctggtcgaggtcggcctgggctacgtccggctcgggcagccggcgacgacgctc
tccggtggcgaggcgcagcgcgtcaagctcgcggccgagctgcagaagcgctccgccggc
cgcacgctctacgtgctcgacgagccgacgacgggtctgcacttcgaggacatccgcaag
ctcctgctggtgctgggccgcctggtcgaccagggcaacagcgtgctggtcatcgagcac
aacctcgacgtcatcaagaccgcggactgggtcgtcgacatgggccccgagggtggttcc
cggggcggcacggtcgtcgcggagggcacgccggagcaggtcgccgccgttcccgagagc
cacaccggccgctacctcgcgccgctcctcgagggcaaggaggccgagcagccccggggc
aaggcgccggcgtcgtccgcgccgctgagccgggccgaggccgccgcgaaggcgaaggcc
gacgcgacgctcgcgcgggcggaggcgaagaaggcggcccggaaggcggcgaaggcgccg
gcgaagaaggccgctgccgcgaaggcgccggcgaaggccgctggagggaaggcggctgcg
ggcggggcctga
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integrated database retrieval system
