Nocardioides sp. Arc9.136: OSR43_10505
Help
Entry
OSR43_10505 CDS
T10603
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
nocr Nocardioides sp. Arc9.136
Brite
KEGG Orthology (KO) [BR:
nocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nocr03019
]
OSR43_10505
Enzymes [BR:
nocr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OSR43_10505
Messenger RNA biogenesis [BR:
nocr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OSR43_10505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WKN50537
LinkDB
All DBs
Position
2148696..2151488
Genome browser
AA seq
930 aa
AA seq
DB search
MSAEEPETDQLSPAQRYAAYRATKQHPVLKDFRALHEFPLDDFQVRACEHIEEGRGVLVA
APTGSGKTIVGEFAIHLALATGRKAFYTTPIKALSNQKYNDLVRRYGPEQVGLLTGDNVV
NGEAPIVVMTTEVLRNMLYAGSRTLIGLGYVVMDEVHYLADRSRGAVWEEVIIHLPESVS
LVSLSATVSNAEEFGEWLETVRGDTATIVEEKRPVPLYQHVMVGRRLLDLFASSDVDAAA
GFVKEGAPVNDELMKVARDDWAASRIKDRRSARGSGARGARQVGNGRRVWIPSRYDVIDR
LERENLLPAIVFIFSRVGCDAAVTQCLNAGVRLTTPAERDEIHAYVEEATRHLAKEDLHV
LGYHDFLEGLTRGVAAHHAGMLPAFKQCVEEMFLRGLCKVVFATETLALGINMPARTVVI
EKLTKWNGENHADITPGEYTQLTGRAGRRGLDVEGHGVVMWQPGMNPRELAGLASTRTYP
LRSSFRPSYNMAVNLVNQFGRARSRELLEQSFAQFQADKAVVGLARQLRKSEDALQGYRD
AAQCHLGDFMEYAGLRRRISDLEKDASRARRQDRRDEVIASLARLKVGDVIDVPSGKFAG
YAVVVDPGYSDEGPRPYVVTLDRQARRLGMIDFQTPVESLARLRVPRSFNGRNPQMRRDL
AAALRTRTRDLPPAQLRRKSSPGDAGLDPEVAELRRKLKEHPCHACPEREDHSRWAERYF
KLERDAQTLARRVEQRTNTVARQFDRVCDVLTVLDYLQGEEVTDRGRHLMRIYSDMDLLA
AECMRNGLWDDLTASELAAVLSVLVFEARRADDQSSPRIPGGRVRGVVEEMGRLWGDLDR
LEKEHRLDFLRQPDLGFAWMAYRWAEGDELDDVLGASELGAGDFVRWMKQLLDLAGQVAD
AAGETPLRGTARDVVKRLRRGVVAYSGLAD
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgaggagcccgagaccgaccagctcagccccgcgcagcgctacgcggcgtac
cgggcgaccaagcagcaccccgtcctcaaggacttccgggccctccacgaattccccctc
gacgacttccaggtgcgcgcctgcgagcacatcgaggagggccgcggcgtgctcgtcgcc
gcgcccaccgggtccggcaagacgatcgtcggcgagttcgcgatccacctggcgctcgcg
accgggcgcaaggcgttctacacgacgccgatcaaggcgctgtcgaaccagaagtacaac
gacctcgtccggcgctacgggcccgagcaggtcggcctgctgaccggcgacaacgtcgtc
aacggcgaggcaccgatcgtggtgatgaccaccgaggtgctgcgcaacatgctctacgcg
gggtcgcgcacgctgatcggcctcggctacgtcgtgatggacgaggtgcactacctcgcc
gaccggtcacgcggcgcggtctgggaggaggtcatcatccacctccccgagtcggtctcg
ctggtgtcgctctcggcgacggtctccaacgccgaggagttcggcgagtggctcgagacc
gtccgcggcgacaccgccaccatcgtggaggagaagcggcccgtgccgctctaccagcac
gtgatggtgggccgccggctgctcgacttgttcgcctcctctgacgtcgacgcggcggcg
ggcttcgtcaaggagggcgctccggtcaacgacgagctgatgaaggtggcccgcgacgac
tgggcggcgtcccgcatcaaggaccgccgctccgcgcggggctcgggtgcccggggagcc
cgccaggtcgggaacggccggcgcgtgtggatccccagccggtacgacgtgatcgaccgg
ctcgagcgggagaacctgctgccggccatcgtcttcatcttcagccgcgtgggctgcgac
gcggccgtcacccagtgcctcaacgccggggtccggctcaccacgcccgccgagcgcgac
gagatccacgcctacgtcgaggaggccacccggcacctggccaaggaggacctgcacgtc
ctgggctaccacgacttcctcgaggggctgacccgcggcgtcgccgcccaccacgcgggc
atgctgccggcgttcaagcagtgcgtggaggagatgttcctccgcgggctgtgcaaggtg
gtcttcgcgaccgagacgctcgcgctcggcatcaacatgcctgctcgcacggtcgtcatc
gagaagctcaccaagtggaacggcgagaaccacgccgacatcacgccgggggagtacacc
cagctcaccggtcgcgccggccgtcgcgggctcgacgtcgagggccacggcgtggtcatg
tggcagccgggcatgaacccgcgcgagctcgccggcctggcctccacccgcacctacccg
ctccggtcgtcgttccgcccgtcgtacaacatggcggtcaacctggtgaaccagttcggc
cgggcgcggtcccgcgagctgctcgagcagtccttcgcccagttccaggccgacaaggcc
gtcgtcggcctggcccgccagctgcgcaagagcgaggacgcgctgcagggctaccgcgac
gccgcgcagtgccacctcggcgacttcatggagtacgccgggctccgccgccgcatctcg
gacctggagaaggacgccagccgcgcacgccggcaggaccgtcgcgacgaggtgatcgcc
tccctcgcgcggctcaaggtcggcgacgtgatcgacgtgccgtcggggaagttcgccggg
tacgccgtcgtggtcgaccccggctacagcgacgagggcccgcggccctacgtcgtcacc
ctggaccgccaggcgcgccggctcgggatgatcgacttccagacgccggtggagtcgctc
gcccggctgcgggtgccgcgcagcttcaacgggcgcaacccgcagatgcgccgggacctc
gctgcggcgctgcgcacccggacccgcgacctgccccccgcccagctgcggcggaagtcc
tcgcccggcgacgccgggctggaccccgaggtggccgagctgcgccggaagctcaaggag
cacccgtgccacgcgtgcccggagcgggaggaccacagccgctgggccgagcgctacttc
aagctcgagcgcgacgcccagaccctcgcccggcgggtggagcagcggaccaacacggtg
gcgcgccagttcgaccgcgtctgcgacgtgctcaccgtcctggactacctccagggcgag
gaggtcaccgaccgcggtcggcacctgatgcggatctactccgacatggacctgctggcc
gccgagtgcatgcgcaacgggctctgggacgacctcaccgcctccgagctcgcggccgtc
ctgtcggtgctggtcttcgaggcccgccgcgccgacgaccagtcctccccgcgcatcccc
ggtggccgcgtccgcggggtcgtcgaggagatgggccggctgtggggggacctcgaccgg
ctcgagaaggagcaccggctcgacttcctgcgccagcccgacctcggcttcgcctggatg
gcctaccgctgggccgagggcgacgagctcgacgacgtgctgggggcctccgagctcggc
gccggcgacttcgtgcgctggatgaagcagctgctcgacctcgcgggccaggtcgccgac
gcggcgggcgaaaccccgctccgcggcaccgcccgcgacgtcgtcaagcgcctgcgccgc
ggcgtcgtggcgtactccggcctggcggactga
DBGET
integrated database retrieval system
